| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0196 |
|---|
| Symbol | |
|---|
| ID | 4477968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 239609 |
|---|
| End bp | 241705 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639724725 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_867846 |
|---|
| Protein GI | 117918654 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00867813 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000723027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGTA CAACCCCAAT TGAGCGTTAT CGTAATATCG GTATTTGTGC TCATGTGGAT
GCAGGTAAAA CCACCACAAC AGAACGTGTT CTGTTCTATA CCGGTTTGTC TCATAAAATC
GGTGAGGTGC ATGACGGCGC CGCGACCACT GACTGGATGG TACAAGAGCA AGAGCGTGGT
ATTACTATCA CCTCGGCTGC TGTTACTACA TTCTGGCGTG GTATGGATGC TCAATTCACT
GAACACCGCA TCAATATCAT CGATACCCCT GGTCACGTTG ACTTCACTAT TGAAGTTGAA
CGTTCTTTGC GCGTTCTCGA CGGCGCTGTC GTGGTTTTCT GTGGTTCTTC AGGTGTTGAA
CCTCAATCAG AAACCGTTTG GCGTCAAGCT GACAAATACC GCGTTCCACG CTTAGTGTTT
GTTAACAAGA TGGACCGCGC AGGTGCGGAC TTTGAACGTG TAGTGAAGCA AATCAGAACT
CGCCTAGGAG CGACTTGTGT GCCTATTCAA CTGAATATCG GTGCAGAAGA AAACTTCACT
GGCGTGATCG ACTTAATCAA GATGAAAGCC ATTAACTGGA ACGAAGCGGA CCAGGGTATG
ACTTTCTCTT ATGAAGAGAT CCCTGCAGAG TTAGCCGATA AAGCGGCTGA AATGCATGAG
TATCTGGTTG AGGCAGCAGC CGAGGCCTCG GATGAACTGA TGGACAAGTA CCTTGAAGAA
GGCACACTGT CAGAAGACGA GATCAAAAAG GCACTGCGTC AGCGTACTAT TAATAATGAA
ATCGTTTTAG CGACCTGTGG TTCTGCATTT AAGAACAAAG GCGTTCAAGC GGTTCTTGAT
GCGGTTGTGG AATTCTTGCC AGCCCCTGTC GATGTGCCTC CAATTAAGGG CATTGATGAC
GATGAGCAAG AAGTTGAGCG CCCATCAGAT GACAATGCCC CCTTTGCGGC GTTGGCATTT
AAGATTGCTA CAGACCCGTT CGTGGGCACT TTGACCTTTA TTCGCGTGTA CTCTGGCGTA
CTCGAATCAG GTTCTGGCGT TTATAACTCT GTTAAACAGA AGCGTGAACG TATCGGCCGT
ATCGTGCAAA TGCACGCTAA CGACCGTACC GAACTGAAAG AAGTACGTGC AGGTGATATC
GCTGCGGCTA TCGGTCTGAA AGAAGTCACC ACGGGTGATA CACTTTGTGA TCCTGATCAC
AAGGTGATCT TGGAACGCAT GGAGTTCCCT GAGCCAGTAA TTACCATTGC CGTTGAGCCT
AAGTCTAAAG CGGACCAAGA TAAAATGGGT ATCGCGCTGC AAAAACTTGC AGCGGAAGAT
CCATCTTTCC GGGTTGAGAC TGACGAAGAA TCATCACAAA CACTGATTTC TGGAATGGGT
GAGTTACACT TAGACATTAT CGTTGACCGT ATGCGTCGCG AATTTGGTGT TGAGTGTAAC
GTTGGTAAGC CACAAGTGGC CTACCGCGAA ACCATTCGCG CATCAGTCGA GGCTGAAGGT
AAATTTGTAC GCCAATCAGG TGGCCGTGGA CAATTCGGTC ATGTTTGGTT AAAACTAGAG
CCTAATGAAG AAGGCGCTGG TTACGAATTT ACCAACGCGA TCGTTGGGGG TGTCGTTCCA
CGTGAATTCA TTCCTGCGGT TGATAAAGGT ATCCAAGAGC AGATGAAGAA CGGTGTTCTC
GCCGGCTTCC CTGTGTTGGA CGTGAAGGTC ACTCTGTTCG ACGGTTCATA TCACGATGTG
GACTCGAATG AAATGGCGTT CAAAATTGCG GGTTCTATGG GCTTCAAAAA GGGTGCGCTC
GAAGCGAATC CTGTGTTGCT CGAGCCTTGC ATGAAAGTAG AAGTAACTAC TCCTGAGAAC
TACATGGGCG ATGTGGTTGG TGACTTAAAC CGTCGTCGTG GTTTGATTGA AGGTATGGAT
GATGGCTTCG GTGGCATCAA AATAGTCCAT GCTGTAGTGC CTCTTTCTGA AATGTTTGGT
TATGCAACTG ATTTGCGTTC TGCGACTCAG GGTCGTGCTT CCTACTCCAT GGAGTTCTTG
AAGTACACTG ATGCACCGCA AAACATTGCG AAAGCGATTA TTGAATCTCG TAGCTAA
|
|---|
| Protein sequence | MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGLSHKI GEVHDGAATT DWMVQEQERG
ITITSAAVTT FWRGMDAQFT EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGSSGVE
PQSETVWRQA DKYRVPRLVF VNKMDRAGAD FERVVKQIRT RLGATCVPIQ LNIGAEENFT
GVIDLIKMKA INWNEADQGM TFSYEEIPAE LADKAAEMHE YLVEAAAEAS DELMDKYLEE
GTLSEDEIKK ALRQRTINNE IVLATCGSAF KNKGVQAVLD AVVEFLPAPV DVPPIKGIDD
DEQEVERPSD DNAPFAALAF KIATDPFVGT LTFIRVYSGV LESGSGVYNS VKQKRERIGR
IVQMHANDRT ELKEVRAGDI AAAIGLKEVT TGDTLCDPDH KVILERMEFP EPVITIAVEP
KSKADQDKMG IALQKLAAED PSFRVETDEE SSQTLISGMG ELHLDIIVDR MRREFGVECN
VGKPQVAYRE TIRASVEAEG KFVRQSGGRG QFGHVWLKLE PNEEGAGYEF TNAIVGGVVP
REFIPAVDKG IQEQMKNGVL AGFPVLDVKV TLFDGSYHDV DSNEMAFKIA GSMGFKKGAL
EANPVLLEPC MKVEVTTPEN YMGDVVGDLN RRRGLIEGMD DGFGGIKIVH AVVPLSEMFG
YATDLRSATQ GRASYSMEFL KYTDAPQNIA KAIIESRS
|
|---|
| |