| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0188 |
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| Symbol | rplK |
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| ID | 4477960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 227514 |
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| End bp | 227942 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639724717 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_867838 |
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| Protein GI | 117918646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000143261 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00929078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAAAA AGATTGATGC TTATATTAAG CTACAAGTGA AATCAGGTTC TGCGAACCCT
TCACCACCAG TTGGTCCAGC TCTGGGTCAG AAAGGTGTGA ACATCATGGA ATTCTGTAAA
GCGTTCAACG CCCGTACAGA AAAAATGGAA AAAGGCATGC CTATTCCAGT CGTGATCACT
GTATACAGTG ACCGTTCATT CACTTTCGAA ACTAAGACTC CGCCAGCTTC TTACTTACTG
AAGACTGCTG CAGGCCTGAA ATCAGGTTCT CCACGTCCAA ACACTCAGAA AGTAGGTACT
ATCGCTCGTG CTAAGATTCA AGAAATTGCT GAATTGAAAG CGGCCGATAT GACTGGTGCT
GATGTTGAAG CGATGACTCG CTCAATCGAA GGTACTGCGC GTTCAATGGG TTTGGTTGTA
GAGGGTTAA
|
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| Protein sequence | MAKKIDAYIK LQVKSGSANP SPPVGPALGQ KGVNIMEFCK AFNARTEKME KGMPIPVVIT
VYSDRSFTFE TKTPPASYLL KTAAGLKSGS PRPNTQKVGT IARAKIQEIA ELKAADMTGA
DVEAMTRSIE GTARSMGLVV EG
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