| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0187 |
|---|
| Symbol | |
|---|
| ID | 4477959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 226834 |
|---|
| End bp | 227385 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639724716 |
|---|
| Product | transcription antitermination protein nusG |
|---|
| Protein accession | YP_867837 |
|---|
| Protein GI | 117918645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000254051 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0190585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CTAAAGAAGC TAAAAAAAGA TGGTATGTAG TGCAGGCATT CTCAGGCTAT
GAAGGCCGAG TTTGTAAGTC ACTGATTGAA TACATTAAAA TGCACGGCAT GGAACAGTAC
TTCGGCGAAG TATTAGTTCC GACTGAAGAA GTCATCGAAA TGCGTGCAGG CCAGCGTCGT
AAGAGCGAGC GTAAGTTTTT CCCTGGCTAT GTGTTAGTCC AGATGGAAAT GAACGATGAC
AGCTGGCATT TAGTCAAAAG CATCCCGCGT GTTTTAGGCT TTATTGGCGG AACTTCTGAT
CGTCCTGCCC CAATTTCAGA TAGAGAAGCG GATGCAATTC TGCGTCGCTT ACAAGAAACC
ACAGCTTCAC CGACTCACCG TGTTATTTTC GAGCCGGGCG AAGTGGTGCG TGTTTGTGAT
GGTCCATTTG CTGACTTTAA CGGTACCGTT GAAGAAGTGG ATTATGACAA GAGCCGCGTA
AAAGTGTCAG TAATGATCTT TGGTCGTTCT ACACCGGTTG AGCTCGATTT TAATCAGGTC
GAAAAAGGCT GA
|
|---|
| Protein sequence | MTEAKEAKKR WYVVQAFSGY EGRVCKSLIE YIKMHGMEQY FGEVLVPTEE VIEMRAGQRR
KSERKFFPGY VLVQMEMNDD SWHLVKSIPR VLGFIGGTSD RPAPISDREA DAILRRLQET
TASPTHRVIF EPGEVVRVCD GPFADFNGTV EEVDYDKSRV KVSVMIFGRS TPVELDFNQV
EKG
|
|---|
| |