| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0185 |
|---|
| Symbol | |
|---|
| ID | 4477957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 224989 |
|---|
| End bp | 226173 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639724714 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_867835 |
|---|
| Protein GI | 117918643 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000202802 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.069078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG CTAAATTTGA ACGTAATAAG CCCCATGTTA ACGTGGGCAC CATCGGTCAC
GTTGACCATG GTAAAACCAC TCTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC
GGTGGTGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACCATCA ATACCTCTCA CATCGAATAC GATACGCCAA CTCGCCACTA CGCACACGTA
GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCGATCC TGGTAGTAGC TTCTACTGAC GGCCCAATGC CACAAACTCG TGAGCACATC
CTGCTGTCTC GCCAAGTAGG CGTACCATTC ATCATCGTAT TCATGAACAA ATGTGACATG
GTTGACGATG CTGAGCTGTT AGAATTAGTT GAAATGGAAG TACGTGAACT GTTATCAGAA
TACGACTTCC CAGGTGATGA CTTACCAGTT ATCCAAGGTT CTGCTCTGAA AGCCCTTGAA
GGCGAGCCAG AGTGGGAAGC TAAGATCATC GAATTAGCGG CGGCACTGGA TTCTTACATT
CCAGAACCAG AGCGTGATAT CGATAAGCCA TTCCTGATGC CAATCGAAGA CGTATTCTCA
ATCTCTGGCC GTGGTACAGT AGTAACAGGT CGTGTTGAGC GTGGTATCGT ACGTGTTGGT
GACGAAGTAG AAATCGTTGG TATCCGTGCA ACCACTAAGA CAACCTGTAC TGGTGTTGAA
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTAT CCTGTTACGT
GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTAT CTAAGCCAGG TTCAATCAAC
CCACACACTA CTTTTGAATC AGAAGTATAC GTTCTGTCAA AAGAAGAAGG TGGTCGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTGACAGGC
ACTATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCAG GCGACAACAT CAAGATGAAA
GTGACTCTGA TCTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGCCGTACAG TAGGCGCTGG TGTTGTAGCT AAGATTTTCG CTTAA
|
|---|
| Protein sequence | MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG
ITINTSHIEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDAELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKII ELAAALDSYI PEPERDIDKP FLMPIEDVFS ISGRGTVVTG RVERGIVRVG
DEVEIVGIRA TTKTTCTGVE MFRKLLDEGR AGENCGILLR GTKRDDVERG QVLSKPGSIN
PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMK
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIFA
|
|---|
| |