| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0183 |
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| Symbol | |
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| ID | 4477951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 222366 |
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| End bp | 223325 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724708 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_867833 |
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| Protein GI | 117918641 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00618712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.258521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA ACTGGGTGAG AAAACGCGAA ATACTGGGAT TGCTGTCGAG CGAACATTTT
GTCTCGGGTG AAGAATTGGC GACACAACTG GGTGTTTCTC GTGCGGCGGT GAGTAAGCAT
GTGGATGCTT TGGAAGATTA CGGCGTGGCA ATTTACAGTG TCAAAGGCCG TGGTTACAAG
TTAGCGAACC CCATCTCCCT CATCGACTCA GCGCGGTTAA TTCAGTCGAT TGATAATCGC
TGCTTTTATT TTGATGAGAT CCCTAGTACT AACGGATTTA TGTTAAGTCA TACGGGTGAG
CTTAAGAGTG GCGACCTGTG TGTCGCGGAG TACCAGTCGG CAGGGCGAGG TCGTCGCGGC
CGTACTTGGG TTTCTCCATA TGGGCATCAC TTATATTTCT CGCAGTTTTG GTCATTCCCC
CAGGGGATGG CGCAGGCGAT GGGCTTAAGC CTAGTGGTGG CTTGTAGTTT GGTCGAGGTA
TTGAAATCCT TTGGGGTAGA TAATATCGGC GTGAAATGGC CAAACGACAT TTACCTGAAT
TATAAAAAGC TTGCTGGGAT TTTAATTGAA ATGTCAGGTC AGGCGGACAG CGAGTGCCAA
TTGATCATTG GTATTGGCGT TAATATGGCC ATGTCAGAAG ACCAAGGAAA AGGCATAGAC
CAGCCTTGGA GCGATTTATC CGCGTTAGCG ACTATGCCGA ATAAAACGGA CCTCGTGATT
GCGCTGCAAA AGCAGCTGAA GAAAGACATT CAACTCTTTG AGCGAGAAGG ACTGGCGGCA
TTCAAACTGC GTTGGCAAGC GGCTGATCTA TTCTATGGCA AAGAGATCCG TTTGCTCATG
GGTGAAAATC ATGTTGAGGG TATTTGCCGC GGTGTCGACG AACAGGGCGC AGTGCTACTT
GAAACCGCCG ATGGCACACA GGCATACATC GGCGGTGAAA TCAGTTTAAG ACCAAGATAG
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| Protein sequence | MSDNWVRKRE ILGLLSSEHF VSGEELATQL GVSRAAVSKH VDALEDYGVA IYSVKGRGYK
LANPISLIDS ARLIQSIDNR CFYFDEIPST NGFMLSHTGE LKSGDLCVAE YQSAGRGRRG
RTWVSPYGHH LYFSQFWSFP QGMAQAMGLS LVVACSLVEV LKSFGVDNIG VKWPNDIYLN
YKKLAGILIE MSGQADSECQ LIIGIGVNMA MSEDQGKGID QPWSDLSALA TMPNKTDLVI
ALQKQLKKDI QLFEREGLAA FKLRWQAADL FYGKEIRLLM GENHVEGICR GVDEQGAVLL
ETADGTQAYI GGEISLRPR
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