Gene Shewana3_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0170 
Symbol 
ID4477933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp203124 
End bp203936 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content52% 
IMG OID639724690 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_867820 
Protein GI117918628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAG AAGAGTTAAT CGACGAGGTG ATTGCGATAG CAACGGATGC GGGTCGCACT 
ATTCGTGAGA TTTACCTCAA GGGTAATTTT GAACGAGAAA CCAAGTCTGA TAATACCCCT
GTCACCTCGG CGGACCTAGC GGCGAATCAG CTGATTTGTG AGCGCTTAGC CGCATTGACA
CCCGATATTC CTATCCTGTC CGAAGAGGCT GCCGATATTC CCCTAAGCGT GCGCGAAGGC
TGGAAACGTT ATTGGTTAGT CGATCCTCTC GATGGCACGG GGGAGTTTAT TGCGGGCAGT
GGTGACTTTT CGGTGATCAT CGCGCTGGTG GAGCACAATC GTCCGGTAAT GGGTGTTGTG
TATGTGCCGA TGACGCAGGT GTGTTATTAC GCCATTGCGG GCTTAGGCGC CTATAAACGC
ACCGATAAGC AGGAAGTGCG TATCAGTAGT CGGCAAATTC AGCATCGTGA GCAAGTTTCT
CTTAGGTTAG CTGTGAGTCG TCGTCAGGAT CCCCAATCCG TGTTGACCCT GTTCAATCAG
CCTAAGCATT GTGAGTTGGT GGTCATGGGC GGTGCGGCCC TGAAGAGTTG TCTGGTTGCC
GAAGGGCGCG CCGATTGCTA TGTGCGAGTC GGGCCAACGG GGGAGTGGGA CACCGGTGCC
GCGCAGATCA TTATTGAGGA AGCGGGTGGC CAGCTCATGG ATACCGAGCT GCAACCTTTA
ACCTACAACG AGCGTGAGAC GCTTGAAAAT CCTAACTTTA TTGTTGTTGG TGCGCCCAAT
TTAGAGTGGG ATAAAATTTT AATTGGTGAA TAG
 
Protein sequence
MKPEELIDEV IAIATDAGRT IREIYLKGNF ERETKSDNTP VTSADLAANQ LICERLAALT 
PDIPILSEEA ADIPLSVREG WKRYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPVMGVV
YVPMTQVCYY AIAGLGAYKR TDKQEVRISS RQIQHREQVS LRLAVSRRQD PQSVLTLFNQ
PKHCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIIEEAGG QLMDTELQPL
TYNERETLEN PNFIVVGAPN LEWDKILIGE