Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0170 |
Symbol | |
ID | 4477933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 203124 |
End bp | 203936 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724690 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_867820 |
Protein GI | 117918628 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0125589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAG AAGAGTTAAT CGACGAGGTG ATTGCGATAG CAACGGATGC GGGTCGCACT ATTCGTGAGA TTTACCTCAA GGGTAATTTT GAACGAGAAA CCAAGTCTGA TAATACCCCT GTCACCTCGG CGGACCTAGC GGCGAATCAG CTGATTTGTG AGCGCTTAGC CGCATTGACA CCCGATATTC CTATCCTGTC CGAAGAGGCT GCCGATATTC CCCTAAGCGT GCGCGAAGGC TGGAAACGTT ATTGGTTAGT CGATCCTCTC GATGGCACGG GGGAGTTTAT TGCGGGCAGT GGTGACTTTT CGGTGATCAT CGCGCTGGTG GAGCACAATC GTCCGGTAAT GGGTGTTGTG TATGTGCCGA TGACGCAGGT GTGTTATTAC GCCATTGCGG GCTTAGGCGC CTATAAACGC ACCGATAAGC AGGAAGTGCG TATCAGTAGT CGGCAAATTC AGCATCGTGA GCAAGTTTCT CTTAGGTTAG CTGTGAGTCG TCGTCAGGAT CCCCAATCCG TGTTGACCCT GTTCAATCAG CCTAAGCATT GTGAGTTGGT GGTCATGGGC GGTGCGGCCC TGAAGAGTTG TCTGGTTGCC GAAGGGCGCG CCGATTGCTA TGTGCGAGTC GGGCCAACGG GGGAGTGGGA CACCGGTGCC GCGCAGATCA TTATTGAGGA AGCGGGTGGC CAGCTCATGG ATACCGAGCT GCAACCTTTA ACCTACAACG AGCGTGAGAC GCTTGAAAAT CCTAACTTTA TTGTTGTTGG TGCGCCCAAT TTAGAGTGGG ATAAAATTTT AATTGGTGAA TAG
|
Protein sequence | MKPEELIDEV IAIATDAGRT IREIYLKGNF ERETKSDNTP VTSADLAANQ LICERLAALT PDIPILSEEA ADIPLSVREG WKRYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPVMGVV YVPMTQVCYY AIAGLGAYKR TDKQEVRISS RQIQHREQVS LRLAVSRRQD PQSVLTLFNQ PKHCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIIEEAGG QLMDTELQPL TYNERETLEN PNFIVVGAPN LEWDKILIGE
|
| |