Gene Shewana3_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0169 
SymbolnudE 
ID4477932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp202502 
End bp203053 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID639724689 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_867819 
Protein GI117918627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00239764 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC GGCACCATAA GCCGGAAATC TTACATACCG AAGTTGTCGC TAAGAGCCGC 
TTGTTTCAAA TTGAACAGGT TCATCTTAAA TTCTCCAACG GTGTCGAGCG CCAGTATGAG
CGGATGAAGG GGGGTAGCCG AGGCGCTGTG ATGGTGGTAC CCATTCATCA AGGCAACATG
CTGTTAGCCC GTGAATATGC CGCTGGAACA GATAATTACG AGCTAGGTTT TCCTAAGGGA
TTAATCGACC CTGGTGAGCA AGCTATCGAG GCGGCCAATC GAGAATTACA GGAAGAGATC
GGTTTTGGGG CGCGTAAACT GACACTGTTG AAAGAACTTA GTCTTGCGCC GGGTTATTTC
TCTAGCAAGA TGCAAATTTT CATCGCAGAA GATCTATATG AAAGCCGCCT AGAAGGCGAT
GAGCCTGAAC CCATAGATGT AGTGCCTTGG GCGTTGGCCG AGTGGGAAGC GTTACTCGAT
AATAGCGATT TTTCCGAATC TCGTAGTGTG AGCGCATTGT TTTTAGCGCA GAAACACCTA
CAACTTAAAT AA
 
Protein sequence
MSQRHHKPEI LHTEVVAKSR LFQIEQVHLK FSNGVERQYE RMKGGSRGAV MVVPIHQGNM 
LLAREYAAGT DNYELGFPKG LIDPGEQAIE AANRELQEEI GFGARKLTLL KELSLAPGYF
SSKMQIFIAE DLYESRLEGD EPEPIDVVPW ALAEWEALLD NSDFSESRSV SALFLAQKHL
QLK