Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0169 |
Symbol | nudE |
ID | 4477932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 202502 |
End bp | 203053 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724689 |
Product | ADP-ribose diphosphatase NudE |
Protein accession | YP_867819 |
Protein GI | 117918627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00239764 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGC GGCACCATAA GCCGGAAATC TTACATACCG AAGTTGTCGC TAAGAGCCGC TTGTTTCAAA TTGAACAGGT TCATCTTAAA TTCTCCAACG GTGTCGAGCG CCAGTATGAG CGGATGAAGG GGGGTAGCCG AGGCGCTGTG ATGGTGGTAC CCATTCATCA AGGCAACATG CTGTTAGCCC GTGAATATGC CGCTGGAACA GATAATTACG AGCTAGGTTT TCCTAAGGGA TTAATCGACC CTGGTGAGCA AGCTATCGAG GCGGCCAATC GAGAATTACA GGAAGAGATC GGTTTTGGGG CGCGTAAACT GACACTGTTG AAAGAACTTA GTCTTGCGCC GGGTTATTTC TCTAGCAAGA TGCAAATTTT CATCGCAGAA GATCTATATG AAAGCCGCCT AGAAGGCGAT GAGCCTGAAC CCATAGATGT AGTGCCTTGG GCGTTGGCCG AGTGGGAAGC GTTACTCGAT AATAGCGATT TTTCCGAATC TCGTAGTGTG AGCGCATTGT TTTTAGCGCA GAAACACCTA CAACTTAAAT AA
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Protein sequence | MSQRHHKPEI LHTEVVAKSR LFQIEQVHLK FSNGVERQYE RMKGGSRGAV MVVPIHQGNM LLAREYAAGT DNYELGFPKG LIDPGEQAIE AANRELQEEI GFGARKLTLL KELSLAPGYF SSKMQIFIAE DLYESRLEGD EPEPIDVVPW ALAEWEALLD NSDFSESRSV SALFLAQKHL QLK
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