Gene Shewana3_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0167 
Symbol 
ID4478304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp190875 
End bp191510 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID639724687 
Productphage tail collar domain-containing protein 
Protein accessionYP_867817 
Protein GI117918625 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATC CATTTATTGG AGAAATCCGC ATGTTCGCTG GTACTTTCGC TCCGCGTGGC 
TGGGCGCTTT GCAATGGACA GTTACTGGCC ATTTCCACCT ACACCGCGCT CTTCTCTCTT
CTGGGTACAA ACTATGGTGG CAATGGCACC ACAACCTTTG GATTGCCTAA TCTGCAAAGT
CGTACTCCTG TGGGTACTGG AACTGGGGGA GGTTTGACAA CAGTTGTTCT CGGGCAGAGC
TCGGGTGCTG AGAACATCAA TCTCACAACC AATCAGCTAC CTATTCATAC ACCAACAGCT
ACTTTCACTG GCAATGCAAG TAGTGTGGCA GCAACTGTTG ATGTTGCTAC CACTACGGCC
ACTGCAATGG TTCCTCCGGC AACGGGCGCA ACTACCTACC TCTCTGCTAC GACAGCTAAG
GCGGGGCCTG CAAATGTTGC GTTTAATGGG TTGTTTACTG GTACGGCGCC AGACTCTACA
AAGGCCAGCC TCGGTGGAGT GCAGGGTAGC GTAACACCTA CAGGCACAGT AACCGTTGGT
CCTGTCGGCG GGGGGCTGCC TGTCGGAATT CGCAATCCCT ATCTGGGAAT GAATTTTATT
ATCGCGTTGG AGGGTATTTA TCCGTCGCGT AATTAA
 
Protein sequence
MADPFIGEIR MFAGTFAPRG WALCNGQLLA ISTYTALFSL LGTNYGGNGT TTFGLPNLQS 
RTPVGTGTGG GLTTVVLGQS SGAENINLTT NQLPIHTPTA TFTGNASSVA ATVDVATTTA
TAMVPPATGA TTYLSATTAK AGPANVAFNG LFTGTAPDST KASLGGVQGS VTPTGTVTVG
PVGGGLPVGI RNPYLGMNFI IALEGIYPSR N