Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0167 |
Symbol | |
ID | 4478304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 190875 |
End bp | 191510 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724687 |
Product | phage tail collar domain-containing protein |
Protein accession | YP_867817 |
Protein GI | 117918625 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATC CATTTATTGG AGAAATCCGC ATGTTCGCTG GTACTTTCGC TCCGCGTGGC TGGGCGCTTT GCAATGGACA GTTACTGGCC ATTTCCACCT ACACCGCGCT CTTCTCTCTT CTGGGTACAA ACTATGGTGG CAATGGCACC ACAACCTTTG GATTGCCTAA TCTGCAAAGT CGTACTCCTG TGGGTACTGG AACTGGGGGA GGTTTGACAA CAGTTGTTCT CGGGCAGAGC TCGGGTGCTG AGAACATCAA TCTCACAACC AATCAGCTAC CTATTCATAC ACCAACAGCT ACTTTCACTG GCAATGCAAG TAGTGTGGCA GCAACTGTTG ATGTTGCTAC CACTACGGCC ACTGCAATGG TTCCTCCGGC AACGGGCGCA ACTACCTACC TCTCTGCTAC GACAGCTAAG GCGGGGCCTG CAAATGTTGC GTTTAATGGG TTGTTTACTG GTACGGCGCC AGACTCTACA AAGGCCAGCC TCGGTGGAGT GCAGGGTAGC GTAACACCTA CAGGCACAGT AACCGTTGGT CCTGTCGGCG GGGGGCTGCC TGTCGGAATT CGCAATCCCT ATCTGGGAAT GAATTTTATT ATCGCGTTGG AGGGTATTTA TCCGTCGCGT AATTAA
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Protein sequence | MADPFIGEIR MFAGTFAPRG WALCNGQLLA ISTYTALFSL LGTNYGGNGT TTFGLPNLQS RTPVGTGTGG GLTTVVLGQS SGAENINLTT NQLPIHTPTA TFTGNASSVA ATVDVATTTA TAMVPPATGA TTYLSATTAK AGPANVAFNG LFTGTAPDST KASLGGVQGS VTPTGTVTVG PVGGGLPVGI RNPYLGMNFI IALEGIYPSR N
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