| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0157 |
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| Symbol | |
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| ID | 4478294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 181314 |
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| End bp | 182081 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724677 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_867807 |
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| Protein GI | 117918615 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA AACAAACTAA GGCTCATAAG GGATTTACCC TGCTGGAAAT GCTGATCGCG
ATTGCGATTT TTGCCATGTT AGGTTTAGCC GCCAATGCGG TACTTAGCAC TGTGCTGACC
AACGATGAAG TGACCCGTAA CTTCTCGGTG CGTTTAAAGG CATTGCAGCA GGGCTTTGGC
GCGATTGAGC GCGACCTTGG GCAGATGGTG GCGCGGACAC CCAGATTACT CGAAGGCGGC
CGTGGTACCA CAGTGTTCCA AACGGGTAAC GATATTTTAG ATTCGGAATC AGAGGCCTTA
GTGTTTTACC GCTTAGGCTG GCTCAACCCC GACGGCTTAT TGCCCCGTGG CAGCATACAG
TCGGTTGCCT ACGTGGTACG CGAAGGAAAA TTAGAGCGTT GGTACTTTCC GTATCCCGAG
CCCGAATTTG GTGCCGAGCC AATGAAGACT GTGATTATCG ACAAGGTGCT CTCGGTCGAG
TATTCCTTCT TTATGGAGGA CAAATGGGAG CGCAAGGTCG AGGCGACCAA GTTACCCAAA
GCCATCGCAA TGGAAATTGA GATTGAAGGC TTAGGCAAAA TTCAACGTAA GTTTATGTTG
CCCTTGGGCG CGGCGGCGCC AGAGAAATCC AATGATGAGG ACAACAAGAA CGACAACGCC
GATGACAATA AAGACGACAA CGGCGACCAA GACAATAATG GCGATGGCTC GGGTAACGGA
GAAGAAGACC CCGGCAAAGG TGACCCTGAA AATGAGGATG GCGCATGA
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| Protein sequence | MSLKQTKAHK GFTLLEMLIA IAIFAMLGLA ANAVLSTVLT NDEVTRNFSV RLKALQQGFG
AIERDLGQMV ARTPRLLEGG RGTTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSIQ
SVAYVVREGK LERWYFPYPE PEFGAEPMKT VIIDKVLSVE YSFFMEDKWE RKVEATKLPK
AIAMEIEIEG LGKIQRKFML PLGAAAPEKS NDEDNKNDNA DDNKDDNGDQ DNNGDGSGNG
EEDPGKGDPE NEDGA
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