Gene Shewana3_0156 details

Gene Information

• Locus tag: Shewana3_0156
• ID: 4478293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. ANA-3
• Kingdom: Bacteria
• Replicon accession: NC_008577
• Strand: +
• Start bp: 180965
• End bp: 181333
• Gene Length: 369 bp
• Protein Length: 122 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 639724676
• Product: general secretion pathway protein I
• Protein accession: YP_867806
• Protein GI: 117918614
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAATACG CTAAGGGTAT GACCCTACTC GAAGTCATTG TGGCCTTGGC GGTATTTGCC 
ATCGCCGCCG TCTCTATCAC CAAAAGCTTA GGTGAACAGA TGGCGAATAT GCCGATTCTG 
GAGTCACGCA CTCTTGCCCA ATGGGTGGCG GATAATCAAA TGGTCGACGC CAGACTCGAT 
CCGCAATTTC CCGAATTAGG CAAAAAAGAA GGGCAGGTAG AACTCGCGGG TAAGGATTGG 
TACTGGCGTA AAGAAGTGGT GAAAACCACG GATGATAACT TTCGCATGAT CCGCATTAGT 
GTCAGTGAAG ATGAGCGTTA TCAGCGTATT GCAGCACAAG TGAGCAGTTA TGTCCTTAAA 
ACAAACTAA 

 

Protein sequence

MKYAKGMTLL EVIVALAVFA IAAVSITKSL GEQMANMPIL ESRTLAQWVA DNQMVDARLD 
PQFPELGKKE GQVELAGKDW YWRKEVVKTT DDNFRMIRIS VSEDERYQRI AAQVSSYVLK 
TN