| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0153 |
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| Symbol | |
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| ID | 4478290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 178677 |
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| End bp | 179900 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724673 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_867803 |
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| Protein GI | 117918611 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAT TTGAATATAA GGCGCTGGAC GCCAAGGGAA AACAGCTAAA AGGGGTGATT
GAGGCGGATA CCGCCAGACA TGCCCGTAGT CAGCTGCGTG ACCAACGCAT GATGCCGCTG
GAGATTTTGC CAGTCACCGA AAAGGAAGCC AAGTCAAAAG GCACCGGATT CTCGCCCTTT
AAGCGCGGGA TTTCGGTGGC GGAATTAGCG TTGATCACCC GTCAAATCGC CACGCTAGTT
GCGGCGGGCT TACCGATTGA GGAGTGTCTC AAGGCGGTGG GGCAGCAATG TGAGAAGGCG
CGTCTCGCCA GCATGATCAT GGCGGTGCGT TCCCGCGTGG TGGAAGGCTA TAGTCTGGCC
GACTCTCTTG CCGAATTTCC GCATATTTTC GATGACTTGT ACCGCGCCAT GGTGGCCTCG
GGTGAAAAAT CCGGCCACTT AGAAGTGGTG CTGAACCGCT TAGCCGATTA CACCGAGCGC
CGCCAGCAGC TGAAGTCCAA ACTGCAACAG GCGATGATTT ACCCCATTAT GCTGACGATA
GTCGCCATTG GGGTGGTATC AGTGTTATTG GCCGCCGTGG TGCCAAAAGT GGTTGGCCAA
TTTGAGCATA TGGGCGCCGA GTTACCCGCT ACAACCCGCT TCTTAATTGC CGCCTCAGAC
TTTGTCCAAC ACTATGGTCT GTTTGTTATC TTGGCTATCG GTATTTTGCT GGTGGTGTTC
CAGCGTCTAC TTAAGTCACC GATTTTCAAG ATGAAATACC ATACGTTTTT GCTAAAAATG
CCGGTGATTG GCCGAGTGAG TAAAGGACTC AATACCGCGC GGTTTGCGCG AACCTTGAGT
ATTTTATCCG CCAGTTCAGT ACCTTTGTTA GATGGGATGC GCATTGCCAG CGAAGTATTG
CAAAATGTGC GGGTGCGAGC GGCGGTGGAT GATGCCACGG CGCGCGTACG GGAAGGAACT
AGCCTAGGTG CAGCGTTGAC TAACACTAAG CTATTCCCTG CGATGATGTT ATATATGATC
GCCTCGGGGG AGAAGAGTGG TCAGCTCGAG GAAATGCTTG AGCGTGCTGC GGATAACCAA
GATAGGGAAT TTGAGAGTAA TGTTACACTG GCGCTGGGTG TGTTCGAGCC CATGTTGGTG
GTGAGCATGG CGGGGGTTGT ACTCTTTATC GTGATGGCCA TTCTGCAACC TATTTTGGCA
CTGAACAATT TGATTAGTGG CTAG
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| Protein sequence | MPAFEYKALD AKGKQLKGVI EADTARHARS QLRDQRMMPL EILPVTEKEA KSKGTGFSPF
KRGISVAELA LITRQIATLV AAGLPIEECL KAVGQQCEKA RLASMIMAVR SRVVEGYSLA
DSLAEFPHIF DDLYRAMVAS GEKSGHLEVV LNRLADYTER RQQLKSKLQQ AMIYPIMLTI
VAIGVVSVLL AAVVPKVVGQ FEHMGAELPA TTRFLIAASD FVQHYGLFVI LAIGILLVVF
QRLLKSPIFK MKYHTFLLKM PVIGRVSKGL NTARFARTLS ILSASSVPLL DGMRIASEVL
QNVRVRAAVD DATARVREGT SLGAALTNTK LFPAMMLYMI ASGEKSGQLE EMLERAADNQ
DREFESNVTL ALGVFEPMLV VSMAGVVLFI VMAILQPILA LNNLISG
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