| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0150 |
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| Symbol | |
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| ID | 4477299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 174052 |
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| End bp | 174978 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724670 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_867800 |
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| Protein GI | 117918608 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00215157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TAGATAAAGT TATCGCTAAA GCTGCAGGTA TCCCGCATAA GCCATTGAGT
CAGGTTGTTT TCTGGTTTGG TTTTATTCTG AGTTTACTCT TAGCCGCGCA AATTACATGG
AAACTCGTAC CTAGTACCTC ATCCCCAACG GCTTGGTCGC CAACGGCTGT CACGACGACG
GGCAAAGGCG CTGGGCAAGT TGATCTTGCG GGATTACAGC AGCTTGCACT GTTTGGTAGA
GCCGATGCCA AATCGGATAA ACCCAAAGTG GAAGTGGTTG AGACTGTGAC CGATGCGCCT
AAGACTTCCC TCTCTATTCA ATTAACGGGT GTGGTGGCTT CAACCGCCGA TCAAAAGGGT
CTCGCGATTA TCGAGTCCAG CGGCAGCCAA GAAACCTACA GCCTAGGCGA TAAGATCAAA
GGCACATCGG CGTCGTTAAA AGAAGTCTAT GCCGACCGGA TTATCATCAC TAACGCGGGC
CGTTACGAGA CCCTGATGCT CGATGGTCTG GTTTACACCA GCCAAAGCCC AGCGAATCAG
CAATTACAAA AGGCTAAGAG TGAAAAGGCA GAAGTGGTTA GCCGCGTTGA TCAACGCAAA
AATACTGAAA TCTCCCAAGA GCTGGCCGAA TCCCGCAGTG AACTCTTAGC CGATCCCAGC
AAAATTACCG ATTACATTGC GATTTCTCCC GTTAGACAGG GCGAAAGCGT CGTGGGCTAC
CGTTTAAACC CGGGTAAAGA TGTGAACCTT TTTAAGCAAG CGGGCTTTAA ACCCAATGAC
CTTGCTAAAT CGATTAATGG ATACGACCTG ACTGTGATGA GTCAGGCGTT AGAAATGATG
AGCCAATTGC CTGAATTAAC TGAAGTTTCC ATCATGGTTG AGCGGGAAGG ACAATTGGTT
GAAATCATGT TTAGTTTGCC GCAATAA
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| Protein sequence | MDLLDKVIAK AAGIPHKPLS QVVFWFGFIL SLLLAAQITW KLVPSTSSPT AWSPTAVTTT
GKGAGQVDLA GLQQLALFGR ADAKSDKPKV EVVETVTDAP KTSLSIQLTG VVASTADQKG
LAIIESSGSQ ETYSLGDKIK GTSASLKEVY ADRIIITNAG RYETLMLDGL VYTSQSPANQ
QLQKAKSEKA EVVSRVDQRK NTEISQELAE SRSELLADPS KITDYIAISP VRQGESVVGY
RLNPGKDVNL FKQAGFKPND LAKSINGYDL TVMSQALEMM SQLPELTEVS IMVEREGQLV
EIMFSLPQ
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