| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0148 |
|---|
| Symbol | hslO |
|---|
| ID | 4477297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 172505 |
|---|
| End bp | 173365 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639724668 |
|---|
| Product | Hsp33-like chaperonin |
|---|
| Protein accession | YP_867798 |
|---|
| Protein GI | 117918606 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.896821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAG ATATTTTAAA CCGCTACCTG TTCGACAATG CCGATGTGCG TGGTGAACTC
GTACAGTTAC AAGACAGCTA TCAACAGGTG ATTGGCTCAC ACGCTTACCC ACCCGTGTTG
CAAATCCTGC TGGGTGAATT GCTGGCGGCA ACGTCGTTGT TAACCGCCAC GTTAAAATTC
AGTGGCGATA TCAGCGTGCA GCTGCAGGGT AACGGCCCAG TATCACTGGC GGTGATCAAT
GGCAATAACC AGCAGCAATT ACGCGGTATT GCGCGCTGGG AAGGCGAGTT AGCCGACGAT
GCTAGCCTAG CCGATCTGTT TGGCCAAGGT TATATGGTTA TCACCCTGAC ACCAGATGAA
GGCGAGCGTT ACCAAGGCGT GGTCGCCCTC GACAAGCCAA CCTTAGCCGC CTGTGTTGAA
GACTACTTTA ACCAGTCAGA GCAATTACCT ACTGCACTGT GGTTATTTGC CGACGGTAAA
CAAGCTGCGG GTATGTTCCT GCAAGTATTA CCAAGCCAAG AAGACCACAA TGCCGACTTC
GAGCATTTGT GTCAGCTGAC CGCGACCATC AAGGCGGAAG AGTTATTCAC CTTAGATGCG
CAGGACATCT TGCACCGCCT ATATCACCAA GAAGAAGTGC GTCTGTTCGA TCCTATCGAA
GTCAGCTTTA AATGCACTTG CTCACGTGAG CGCAGCGCAG CCGCGATCAA AACGATTGAT
CAAGCCGAAG TCGAAGCCAT TCTGGCCGAA GACGGTAAGG TCGAAATGGG TTGTGAATAC
TGCAATGCGA AATACGTATT CGATGGCATT GATATCGCAG CTATTTATGC CAACGGCACC
GGCTCAAATA CCCAGCAGTA A
|
|---|
| Protein sequence | MIQDILNRYL FDNADVRGEL VQLQDSYQQV IGSHAYPPVL QILLGELLAA TSLLTATLKF
SGDISVQLQG NGPVSLAVIN GNNQQQLRGI ARWEGELADD ASLADLFGQG YMVITLTPDE
GERYQGVVAL DKPTLAACVE DYFNQSEQLP TALWLFADGK QAAGMFLQVL PSQEDHNADF
EHLCQLTATI KAEELFTLDA QDILHRLYHQ EEVRLFDPIE VSFKCTCSRE RSAAAIKTID
QAEVEAILAE DGKVEMGCEY CNAKYVFDGI DIAAIYANGT GSNTQQ
|
|---|
| |