Gene Shewana3_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0144 
Symbol 
ID4477293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp165232 
End bp166965 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content48% 
IMG OID639724664 
Producthypothetical protein 
Protein accessionYP_867794 
Protein GI117918602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC CTAAACTGCT CTCTTTGCTG ATCGCCACCA GTTTGCTGAC GGCATGTTCT 
GGCTCAGACG ATAAAGATGA CACCACCACG ACGCCAGAGC CGACGCCTCC TACTGAATAC
GCACATAAAG TCACAGGTCA GGTCACTTAT ATCGGCGCTA TCGCTGGGGC CAACGTGTGC
GTGGATCTTA ACCAAGACTT AAGCTGCTCA GAGGGTGAGC CGAGCACTAC TACGGACACT
GACGGTAAAT ATCAAATCGA TTGGAAAAGC GCGACCGAAA ATCCTAACTA TTACCTGCTG
GCTAATTGGA TTGATAACGC GCCTTCATCT GCACGCTCAG CATTGGCGGT GAGCTCCGCC
GCAGCTCACC CCAACGCCAC TACAGGTGGC ATGAATATCG TTGCCCTGCC CGATCATGCG
GGTCATATCA ACGCGCTGAC CAATATTGAG TTTTCACGCT ATCGTAAGAT GATTGAGGCA
GACTTAACGC CACAGCAAGT GATTGAGTTC CGTGCCAGAC TCAAATCCTT ATACGCCACT
GGATTTAAAC AAGTCGAAGC CGATTTATTT AGTCTTTCGC CCGAAATCAC CCTGCAACCC
ACATTTATCG ACACCCTGCT GTTACACGAT TATCTGCTAA ACCTCACCAA TGAGCGCACA
GTGGAAATTT TGGCGGCTAT CGAAGTGTTA ATCGCCGCAT TTGAAGCCTT CGAGAATTTA
ATCCTAGGGT ACGGCTTTGG CACTGAGGCT TATCTGCAAA CCAATCCCGT TGCCGTCACC
AATAAGGTGG AGAGCACCTT AGTGTCCTTC GGTTATATGG AAGCGCCGGT TGATGGTAAG
GCGATGAACA GCACTGACTG GGATACAGTG TTTAGCAGCA TGCTCAATCA TACCGACGCA
TCTCATGTGC TCAATATCGC CACCGTTCGC AACAGCCACT TTGTCAGCTT AGATTATGGT
ACTGCTGACC AAACTCTTAC TGGGGTATTT TCAGGTGACG CTGTGATGAT CTTCGACAAC
TCGTCTGGAG AGGAGGTCCC TACCGAATGC TGGAATGAGC CGATGAAAAA ATGGATCAAT
GCCTCGCGTA ACGACCAAGG GTATGTCCTT AAAGAACCTG TGATTGAAGG TAACAAAATA
AAGACCGTGT ATGCTGGCAC TGAAATCCCT GTCGAAATGA ATTTCCATAA GTATCAGAAC
ACTGCTGCTG ACTGGCAAGA TTTGCTGGCA AACCTTCCGA GCGACCTCAA ACTGGCGTCA
CTCAGCTGGC CTGCGCAAAT ATATCGCATG GATATTAAAC AAACGGCCGA CGTGTTATGC
CGCGAAGAAG ATCCCATCAC CTATGAAACG GGTGTTGAAA CCACGAGCGA GCTTTCTACT
AGCTTAATCG TAGAGCTATT GTGGCCCTTC GCTTACCCCG AGAGTTACGT TGAGGACTCA
ACGAATAAAT TCACCATTCT CGATAGCTTC GGTCAGCCTG AAAGCCAACA TGAATGGAGC
ATTAGCACCA GTCCAAACGG CGGCAAGCTG CTAACTATCA CTGAAATTGT GGAGGATCCG
ATTGCGAGCC AGATGGTGCA ACCTCGCTAC TACCTTGTGA CCTCAAACTT GCTGACTGAA
GTTGAGCTAA ACACGGCATT TGATACGACT GACAATAAAC AGTTATATCG CTTTACCTAC
GACCAAAGCT TCAGCAATAC CCTGTACAAC CACTTTAAGT CGCTAGCAAA ATAA
 
Protein sequence
MFKPKLLSLL IATSLLTACS GSDDKDDTTT TPEPTPPTEY AHKVTGQVTY IGAIAGANVC 
VDLNQDLSCS EGEPSTTTDT DGKYQIDWKS ATENPNYYLL ANWIDNAPSS ARSALAVSSA
AAHPNATTGG MNIVALPDHA GHINALTNIE FSRYRKMIEA DLTPQQVIEF RARLKSLYAT
GFKQVEADLF SLSPEITLQP TFIDTLLLHD YLLNLTNERT VEILAAIEVL IAAFEAFENL
ILGYGFGTEA YLQTNPVAVT NKVESTLVSF GYMEAPVDGK AMNSTDWDTV FSSMLNHTDA
SHVLNIATVR NSHFVSLDYG TADQTLTGVF SGDAVMIFDN SSGEEVPTEC WNEPMKKWIN
ASRNDQGYVL KEPVIEGNKI KTVYAGTEIP VEMNFHKYQN TAADWQDLLA NLPSDLKLAS
LSWPAQIYRM DIKQTADVLC REEDPITYET GVETTSELST SLIVELLWPF AYPESYVEDS
TNKFTILDSF GQPESQHEWS ISTSPNGGKL LTITEIVEDP IASQMVQPRY YLVTSNLLTE
VELNTAFDTT DNKQLYRFTY DQSFSNTLYN HFKSLAK