| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0134 |
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| Symbol | ribB |
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| ID | 4477283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 152062 |
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| End bp | 152715 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724654 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_867784 |
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| Protein GI | 117918592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0635425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAGT CTTTACTTGC TCCTTTTGGT ACTGCTATCG AACGCGTTGA AGCGGGTCTT
GAAGCCCTGC GTCAAGGCCA AGGTGTGTTG GTCGTCGACG ACGAAGATAG AGAAAACGAA
GGCGACTTAA TTTTTGCCGC CGAGTCACTC ACCAATGCTC AAATGGCTAT GCTTATTCGC
GAATGCAGCG GTATCGTGTG TTTGTGTTTA CCAGATGAAA AGGTCAAAGC CCTTGAGCTG
CCACCTATGG TAGAAAACAA CTCGAGCCAA TATGGCACCG CCTTTACCGT GAGTATCGAA
GCCAAAGTAG GTGTTACCAC TGGCGTTTCG GCTGCTGACC GTGTCACCAC CATTAAAACC
GCTATTGCCG ACAATGCTAA GCCAAGCGAT TTAGCGCGCC CAGGCCATGT GTATCCACTG
CGCGCCCAAC CCGGCGGCGT ATTAACTCGC CGTGGCCACA CCGAAGGCAC TATCGATTTA
ATGCAACTGG CCGGACTCAA ACCTGCGGGC GTGTTATGTG AAGTCACCAA TCCCGATGGC
ACTATGGCGC GTCTGCCAGA AATTATCGCC TTTGGTGCCG AGCACAATAT GCCTGTGCTG
ACGATTGAAG ATATCGTTAT TTACCGTAAG TCGTTATTAG CCAACGTTGG CTAA
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| Protein sequence | MNQSLLAPFG TAIERVEAGL EALRQGQGVL VVDDEDRENE GDLIFAAESL TNAQMAMLIR
ECSGIVCLCL PDEKVKALEL PPMVENNSSQ YGTAFTVSIE AKVGVTTGVS AADRVTTIKT
AIADNAKPSD LARPGHVYPL RAQPGGVLTR RGHTEGTIDL MQLAGLKPAG VLCEVTNPDG
TMARLPEIIA FGAEHNMPVL TIEDIVIYRK SLLANVG
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