Gene Shewana3_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0128 
Symbol 
ID4477277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp144459 
End bp144755 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content53% 
IMG OID639724648 
Producthypothetical protein 
Protein accessionYP_867778 
Protein GI117918586 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000259025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTA CCTCACCACT GTTAATCGGC CTGATCATAT GCGGCAGCTT AGTCGGCTGC 
GGCGAGAAGA CTGAACCTGC AACTCAGGCG CCCGCCGAAG TAACAACCGA AGCCAAAGCT
GGCGCTAAGG TGCAAATCGC CAACCCAGCC GCCGAATATT GCGTCTCACT GGGCGGCACT
TCAGAAATCC AGAAGACAGC TGAAGGTGAA CATGGCATTT GTACTTTACC AAGCGGTGAA
AAAATTGATG AGTGGGCGCT ATTTCGTCGC GACCACCCAC AGGAAAACGC CCAGTAA
 
Protein sequence
MKFTSPLLIG LIICGSLVGC GEKTEPATQA PAEVTTEAKA GAKVQIANPA AEYCVSLGGT 
SEIQKTAEGE HGICTLPSGE KIDEWALFRR DHPQENAQ