| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0125 |
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| Symbol | |
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| ID | 4477274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 142187 |
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| End bp | 142750 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724645 |
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| Product | chorismate lyase |
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| Protein accession | YP_867775 |
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| Protein GI | 117918583 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.145702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000241246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATGTGA CCAGCTTAAG CTTCCCCTAT GGCGAATCTA TTCAATGGTT TTGTGCCGAT
AATGCCAAAA ATCTTCCCTC TTCTCCCCTT AAGGAATGGT TGCTAGCACC GGGAAGCCTG
ACACAAAAGC TCAAGGGCTG TTGTGATAAG TTCGAAGTCA AAATCCTCGG TGAAGGCCAA
TGTGCCCCGC TCGAAGGGGA ATATCCCAAG CAAAATGCCG TTTGGGTGCG AGAAGTGTTA
CTCTGCCTCG ATTCCGTGCC TTGGGTCTTT GCTAGAACTT TGATCCCGCA ATCTTTATTA
TCGACCCGCC AAGCCGATTT TTTAGGCCTA GGTACACGCC CACTGGGTGA ATTATTGTTT
AGCCAAGACA GTTTTGTGCC CGGTCGCATC GAAATAGCCC GCTTTACCAC CGACAGTCGC
CTCGCTCAGC TCGCTCAGAG TTTAGCGCAA AACGTCGAAC ACGAGCTCTG GGGCCGACGC
CGGTATTTTC ACCATGACGA GGAGGAAATG TTTGTCAGCG AAATGTTCCT CCCGGCCGCA
GTGCAAGCGA TGGCTAGGCT ATAG
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| Protein sequence | MNVTSLSFPY GESIQWFCAD NAKNLPSSPL KEWLLAPGSL TQKLKGCCDK FEVKILGEGQ
CAPLEGEYPK QNAVWVREVL LCLDSVPWVF ARTLIPQSLL STRQADFLGL GTRPLGELLF
SQDSFVPGRI EIARFTTDSR LAQLAQSLAQ NVEHELWGRR RYFHHDEEEM FVSEMFLPAA
VQAMARL
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