Gene Shewana3_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0121 
Symbol 
ID4477270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp135860 
End bp136660 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content53% 
IMG OID639724641 
Producthypothetical protein 
Protein accessionYP_867771 
Protein GI117918579 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000239826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCATAC TCTTCGTCGC CCTTAAAACT CATCCCCAGT ATCCGCTGAT CATTTGCGCG 
AATAGGGATG AGTTTCACCA CAGACCCACA GCCCCAGCAC ACTTTTGGCC ACCGGAGCAG
AATATGCTCG CGGGCAAGGA CTTGCAGGCA GGTGGCACTT GGTTTGGGGT GAATAAACAG
GGGCAAATTG CGGGAGTCAC TAACCTGAGG GTGGCGCAAA AGTCCCAAGA GCCAATGCGT
AGCCGCGGCG AGCTGATCAT TAAAGCCCTA AGCTCGGGTT CGCTTATCTG TCCTAACTGG
CTTGAGGAAC ACGCCGAAGA TTATCAGCCA TTTAATCTCG TGTTTGGCCA AGGCACCAAC
CTCTATTGCT TCAACAGTCT TAAGCGGAAC ACGGTAAAAC TCACGGCAGG ATTCCACGCC
ATTAGCAATG GCGCGCTCGA TGATATCTGG CCGAAAATGG CTAAGGGCCA ACGCTCGCTC
GAGGCCCTTA TCCAACAATC GGAACCGCTT GAGCTAGAGT CGCTGATTAA GTTAATGCAG
GATGATTCGC GTCCAGAGGA TAACGAGCTA CCCGACACTG GCGTCGGGCT AGAATGGGAA
CGCCGACTCG CGGCAATTTA TATTCGTCAC CCCGACTATG GCACCCGCTC CACCAGCATT
TTACTGCAAA ATGCCCAAGG GGAAGTCCAG TTTACCGAAG TAAGATATGA CGGTAAGGGT
CGGCGACTGG GACAGCAGGA CTTTCACTTC ACCCTGCCAT CGCAATTACC TAAAGAGCCG
GAATGTCTCG CCAATTTTTA G
 
Protein sequence
MCILFVALKT HPQYPLIICA NRDEFHHRPT APAHFWPPEQ NMLAGKDLQA GGTWFGVNKQ 
GQIAGVTNLR VAQKSQEPMR SRGELIIKAL SSGSLICPNW LEEHAEDYQP FNLVFGQGTN
LYCFNSLKRN TVKLTAGFHA ISNGALDDIW PKMAKGQRSL EALIQQSEPL ELESLIKLMQ
DDSRPEDNEL PDTGVGLEWE RRLAAIYIRH PDYGTRSTSI LLQNAQGEVQ FTEVRYDGKG
RRLGQQDFHF TLPSQLPKEP ECLANF