Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0121 |
Symbol | |
ID | 4477270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 135860 |
End bp | 136660 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724641 |
Product | hypothetical protein |
Protein accession | YP_867771 |
Protein GI | 117918579 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000239826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGCATAC TCTTCGTCGC CCTTAAAACT CATCCCCAGT ATCCGCTGAT CATTTGCGCG AATAGGGATG AGTTTCACCA CAGACCCACA GCCCCAGCAC ACTTTTGGCC ACCGGAGCAG AATATGCTCG CGGGCAAGGA CTTGCAGGCA GGTGGCACTT GGTTTGGGGT GAATAAACAG GGGCAAATTG CGGGAGTCAC TAACCTGAGG GTGGCGCAAA AGTCCCAAGA GCCAATGCGT AGCCGCGGCG AGCTGATCAT TAAAGCCCTA AGCTCGGGTT CGCTTATCTG TCCTAACTGG CTTGAGGAAC ACGCCGAAGA TTATCAGCCA TTTAATCTCG TGTTTGGCCA AGGCACCAAC CTCTATTGCT TCAACAGTCT TAAGCGGAAC ACGGTAAAAC TCACGGCAGG ATTCCACGCC ATTAGCAATG GCGCGCTCGA TGATATCTGG CCGAAAATGG CTAAGGGCCA ACGCTCGCTC GAGGCCCTTA TCCAACAATC GGAACCGCTT GAGCTAGAGT CGCTGATTAA GTTAATGCAG GATGATTCGC GTCCAGAGGA TAACGAGCTA CCCGACACTG GCGTCGGGCT AGAATGGGAA CGCCGACTCG CGGCAATTTA TATTCGTCAC CCCGACTATG GCACCCGCTC CACCAGCATT TTACTGCAAA ATGCCCAAGG GGAAGTCCAG TTTACCGAAG TAAGATATGA CGGTAAGGGT CGGCGACTGG GACAGCAGGA CTTTCACTTC ACCCTGCCAT CGCAATTACC TAAAGAGCCG GAATGTCTCG CCAATTTTTA G
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Protein sequence | MCILFVALKT HPQYPLIICA NRDEFHHRPT APAHFWPPEQ NMLAGKDLQA GGTWFGVNKQ GQIAGVTNLR VAQKSQEPMR SRGELIIKAL SSGSLICPNW LEEHAEDYQP FNLVFGQGTN LYCFNSLKRN TVKLTAGFHA ISNGALDDIW PKMAKGQRSL EALIQQSEPL ELESLIKLMQ DDSRPEDNEL PDTGVGLEWE RRLAAIYIRH PDYGTRSTSI LLQNAQGEVQ FTEVRYDGKG RRLGQQDFHF TLPSQLPKEP ECLANF
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