| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0117 |
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| Symbol | |
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| ID | 4477266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 132797 |
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| End bp | 134065 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724637 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_867767 |
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| Protein GI | 117918575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0222536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCAAG AAATTCGCCT TGAAATCTCG GGCTGGTTAT CGAGTGTCGG GATCGACAGC
CAACCGTCCG ACAGCATTTC AACGAGCATT ATGCTGCTTG CCTGTGTGCT GGTGGCGGCC
ATTGCCTATT TTATTATGCG CCGAGGGGTG ATCCGCGCGG TGAACATGGT GATCCTGCGC
TCCAAGGCGA CGTGGGACGA TGTGTTTATG CGCTATAAAG TGCTCGAAAA GCTGGCGATG
TTAGTCCCCG CGATAGTGCT TAACCTGCTA GTGCCCATTA CCTTAACCGA GCACCCCGTG
CTTAGCAGTT TAGTCGACCG TCTATTGAGT ATTTGGTTGG TTATCCTGAT GATCCGCGCC
ATTTACGCTG GGCTCGATGC GGTTAATGAG ATTTCCGATG TCAATCTGGT CAGTCGCCGC
TTGCCGGTAA AAAGCTTTGT GCAGCTGATT AAACTCTTCC TGTTCTTCGT CGGTCTGATC
GTGTCGATTT CCGTACTGGC GGATCAGTCC CCCGTGTACT TCCTCAGCGG TTTAGGTGTG
GCAACGGGTT TTGTGATGTT AGTGTTCCGC GACACCATTT TGGGCTTTGT GGCGGGCATT
CAGCTCGCCG CCAACCGCAT GGTGAGCAAG GGCGACTGGA TCCAAATGGA CAAGTACGGC
GCTGACGGTG CGGTGGAGGA AGTGTCCTTA ACCACGGTCA AAGTGCGTAA CTGGGATAAG
ACCATCACCA TGATCCCCGC TTATGCCTTA GTGTCGGATG CGTTTCGTAA CTGGCGCGGT
ATGTCTGAAT CGGGCGGTCG CCGTATCAAG CGTGCGGTCA ATATCGATAT CAACAGCATT
AAGTTTTTAT CTGAGGAAGA GCGAAATCGC CTCAGTAAAA TCAATTGCTT GAAAGAGTAT
TTCCCCGCCA AGATCAGTGA AATTCAAGAG TCGAATGCCA AAGTGTCGGA TCTGGACATG
AAGGTCAACG GTCGCCATCT GACCAATGTC GGCACCTTCC GCGCCTATTT GCAGGAGTAC
CTGCAACGCC ACGATAAAGT ACATAAGGAT ATGACCCTGA TGGTGCGCCA ACTGGCCCCC
ACGACCGAAG GTTTACCGAT AGAGATTTAT ATCTTTACCA ATGACACCCG TTGGGCTTTT
TATGAGGCGA TACAAGCGGA TATCTTCGAC CATATCTTTG CCGTATTGCC CGAGTTTGGT
TTACAGGCCT TCCAAGCGCC GACAGGCAAC GATATCCGCA GTCTAAAATC GGTGAAAGTC
GAGGGCTAA
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| Protein sequence | MDQEIRLEIS GWLSSVGIDS QPSDSISTSI MLLACVLVAA IAYFIMRRGV IRAVNMVILR
SKATWDDVFM RYKVLEKLAM LVPAIVLNLL VPITLTEHPV LSSLVDRLLS IWLVILMIRA
IYAGLDAVNE ISDVNLVSRR LPVKSFVQLI KLFLFFVGLI VSISVLADQS PVYFLSGLGV
ATGFVMLVFR DTILGFVAGI QLAANRMVSK GDWIQMDKYG ADGAVEEVSL TTVKVRNWDK
TITMIPAYAL VSDAFRNWRG MSESGGRRIK RAVNIDINSI KFLSEEERNR LSKINCLKEY
FPAKISEIQE SNAKVSDLDM KVNGRHLTNV GTFRAYLQEY LQRHDKVHKD MTLMVRQLAP
TTEGLPIEIY IFTNDTRWAF YEAIQADIFD HIFAVLPEFG LQAFQAPTGN DIRSLKSVKV
EG
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