Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0106 |
Symbol | |
ID | 4477254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 121113 |
End bp | 122543 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639724625 |
Product | selenocysteine synthase |
Protein accession | YP_867756 |
Protein GI | 117918564 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAA TGATGACCCA AGTACCCGAT ACACCCCAAG CCCTGTACCG CGCGCTGCCG TCGATGGACA GTCTGCTCGC CGATGCAATA TTGGCGCCCC TGCTGCAAAG CTATGGTAAA GCGGCGGTAA AGGCGGCGCT GGATAGCCAG TTACGCACGG CGCGTGAGCT GATAGCTCAG GAGCGACGTT TACCCGCTTG GTGTGCTAAC CCGTCATTAT TGAACGGATA TTTGGTTGAT CAATTGTCTA AGGACTATAG CCATAGTCTT AAGCCCGTGT GGAACCTCAC GGGAACTATC CTGCATACCA ATCTTGGTCG CGCCCAGCAG TCTGAGGCGG CCATTCGGGC GGTGACCTCT GTGATGCGTT ATCCCACGCC GCTGGAATTT GAGTTGGCAG CGGGTGAACG CGGCCATCGG GATAATGCCA TTAGTGGGTT AATCCAGCGC TTAACAGGAG CTGAGGCCTG CTGCGTGGTG AATAACAACG CCGCTGCTGT GTTGCTGATG TTGTCGGCGG TGGCGGCGGG TAAAGAAGTG ATTGTCTCCC GCGGCGAGCT GGTGGAAATC GGCGGCGCCT TTCGTATTCC TGACATTATG CGCCAAGCGG GCTGTATCTT AGTGGAAGTT GGCAGCACTA ATCGTACTCA CCTTAAGGAC TATGAGCAGG CGATCACCGA AAATACCGCC GCCATCATGA AGGTGCACAC CAGCAACTAC CATATCAGTG GCTTTACCGC TTCGGTGGAT GAGGCCAGAT TAGGCCAACT CTGCCGCGAG CGTGGGGTCG CGCTGATTTC GGATCTTGGC AGTGGTTCAC TCACCGACTT ACGCCGTTTT GGCCTGAAAC AAGAGCCGAC TCCCCAAGCC ATGCTGGCGG ATGGGGTCGA TCTGGTTAGC TTCTCCGGCG ATAAACTCCT TGGCGGCCCG CAATCGGGTT TGATTGTCGG CAAACAGGCG CTGATCAACA AACTTCAAAG TCATCCGCTC AAGCGTGCAT TGCGCTGCGA CAAGCTGATT CTCGCGGCGC TCGAGGCGAC GCTGATCCAC TATTTGAACC CCGAAACCTT GGATCGGGAA CTGCCGATTA TGGCTAAATT TGCCCGCAGC CAAGCTGAGT TACGTCAAAT CGGTGAGCGT CTGCAGCGCG CCTTAGAGCC GCTGTTTGCA CCGAGTTATG GCATCGAGCT AGTGGAGTGC CAAACCCAAG TCGGTAGCGG CTCGCAGCCC GATACCTTTT TGCCCTCAAT CGCCCTGTGC TTTAACGCGC AAGAGGGCGG CAGTTTAACG TTGCTCGAGC AGCATTTTAA GCAGGCGCAG CGCCCTGTGA TTGGCCGTAT GACCCAAGAT CAACTTCGCC TCGATCTGCG CGGTATCGAT GATGAGGCCG AGTTGTTAGC CGAACTCAGC ACCTTAGGTG TGCAGCTATG A
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Protein sequence | MIQMMTQVPD TPQALYRALP SMDSLLADAI LAPLLQSYGK AAVKAALDSQ LRTARELIAQ ERRLPAWCAN PSLLNGYLVD QLSKDYSHSL KPVWNLTGTI LHTNLGRAQQ SEAAIRAVTS VMRYPTPLEF ELAAGERGHR DNAISGLIQR LTGAEACCVV NNNAAAVLLM LSAVAAGKEV IVSRGELVEI GGAFRIPDIM RQAGCILVEV GSTNRTHLKD YEQAITENTA AIMKVHTSNY HISGFTASVD EARLGQLCRE RGVALISDLG SGSLTDLRRF GLKQEPTPQA MLADGVDLVS FSGDKLLGGP QSGLIVGKQA LINKLQSHPL KRALRCDKLI LAALEATLIH YLNPETLDRE LPIMAKFARS QAELRQIGER LQRALEPLFA PSYGIELVEC QTQVGSGSQP DTFLPSIALC FNAQEGGSLT LLEQHFKQAQ RPVIGRMTQD QLRLDLRGID DEAELLAELS TLGVQL
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