Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0101 |
Symbol | |
ID | 4478037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 113437 |
End bp | 114978 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724621 |
Product | histidine ammonia-lyase |
Protein accession | YP_867752 |
Protein GI | 117918560 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAG TCAATCATTT AGTATTAACG CCCGGCAGTT TAAGTCTGGC GCAACTGCGT GAAATCAGCC GCCATAAGCT GACACTCGAA CTGGCGCCTG AGGCGATAAA TGATATCAAC ACCAGCGCGC AAATCGTGCA AAAGGTGTTG GATGAAGGTC GCACCGTTTA CGGCATCAAC ACGGGTTTTG GTCTGCTGGC CAACACTAAG ATTGCCCCGG AAGATCTGCA ATTACTGCAA CGCTCTATCG TGTTATCCCA CGCTGCGGGC ACGGGCCAAT ACATGCAGGA CGCGACCGTG CGCCTGATGA TGGTGTTAAA GATCAACTCC TTAAGCCGTG GCTTCTCGGG TATCCGTTTA GAAGTGATTA ATTTCCTTAT CAGCCTAGTG AATGCCGAGG TTTACCCCTG CGTGCCTGAA AAAGGTTCTG TGGGTGCCTC TGGCGACTTA GCGCCGTTAG CCCATATGTG TTTGCCGCTG TTGGGTGAAG GCGAGATGAG CTATCAAGGT CAGATTATTT CGGCCGCCGA AGGCTTAGAA ATCGCTGGCC TAAAGCCAAT CGATTTAGCC GCGAAGGAAG GCTTAGCCCT GCTCAACGGT ACTCAGGCTT CCACGGCACT GGCGTTGGAA GGCTTGTTCC ACGCTGAAGA CTTGTTTGCT GCAAGCTCAG TGATTGGCGC CATGAGCGTC GAGGCAGCCA TGGGTAGCCG CAGTCCGTTT GACCCACGCA TTCATGCGGC CCGTGGTCAG AAAGGACAAA TCGATGCGGC CATGGTGTTC CGTCATCTGC TGGGCGAAGA GTCTGAAATC AGCTTGAGCC ACATCAACTG CGAGAAGGTG CAAGATCCTT ACTCACTGCG CTGCCAACCA CAGGTATTAG GTGCGTGTTT AACCCAAATC CGCCAAGCGG CCGAGGTGTT AGGCACTGAG GCCAATGGCG TGACCGATAA CCCGTTGGTA TTCCAAGATA CTGGCGATAT TATCTCCGGC GGTAACTTCC ACGCCGAGCC CGTTGCTATG GCAGCCGATA ACTTGGCGAT TGCGATTGCC GAATTAGGCG CGATTGCAGA GCGTCGTATC GCGCTGCTCA TCGACTCTAG TCTGTCTAAA CTGCCACCTT TCCTGGTTAA AAACGGTGGA GTGAACTCGG GCTTTATGAT CGCCCAAGTG ACGGCGGCGG CATTGGCCTC TGAAAACAAA ACTTACGCCC ATCCAGCATC GGTCGACAGT TTACCGACCT CGGCCAACCA AGAAGACCAT GTGTCTATGG CGACTTTTGC GGCGCGCCGT TTACGGGATA TGAGCGAAAA CACCCGTGGC GTGTTAGCGG TTGAGTTATT GGCGGCCGCC CAAGGCTTGG ATTTCCGCGC GCCATTAATG CCAAGCAAAG CAGTGGCGCA GGCGAAGGCC GAGCTACGCG AAGTGGTTGC CTACTATGAT AAAGACAGAT ACTTTGCGCC GGATATCGAT GCGGCAACGG ATCTGCTTTA TACCGCCAGC TTCAATGCTT ACTTGCCCCA AGGCGTATTG CCGAGTCTGT AA
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Protein sequence | MKSVNHLVLT PGSLSLAQLR EISRHKLTLE LAPEAINDIN TSAQIVQKVL DEGRTVYGIN TGFGLLANTK IAPEDLQLLQ RSIVLSHAAG TGQYMQDATV RLMMVLKINS LSRGFSGIRL EVINFLISLV NAEVYPCVPE KGSVGASGDL APLAHMCLPL LGEGEMSYQG QIISAAEGLE IAGLKPIDLA AKEGLALLNG TQASTALALE GLFHAEDLFA ASSVIGAMSV EAAMGSRSPF DPRIHAARGQ KGQIDAAMVF RHLLGEESEI SLSHINCEKV QDPYSLRCQP QVLGACLTQI RQAAEVLGTE ANGVTDNPLV FQDTGDIISG GNFHAEPVAM AADNLAIAIA ELGAIAERRI ALLIDSSLSK LPPFLVKNGG VNSGFMIAQV TAAALASENK TYAHPASVDS LPTSANQEDH VSMATFAARR LRDMSENTRG VLAVELLAAA QGLDFRAPLM PSKAVAQAKA ELREVVAYYD KDRYFAPDID AATDLLYTAS FNAYLPQGVL PSL
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