Gene Shewana3_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0098 
Symbol 
ID4478034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp109462 
End bp110688 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content52% 
IMG OID639724618 
Productimidazolonepropionase 
Protein accessionYP_867749 
Protein GI117918557 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGG ATCAGGTTTG GATAGACGTT AACGTAGCAA CAATGGACCC TTCCATATCA 
GCACCTTACG GCGCAATTAC CAATGCAGCT ATCGCAGTAA AAGACGGTAA AATTGCCTGG
TTAGGCCCAC GCAGCGAGCT GCCCGCCTTC GATGTGTTGT CCATTCCTGT TTACAGGGGC
AAGGGCGGTT GGATCACTCC GGGGCTGATT GATGCCCACA CCCATTTAGT GTTTGCCGGT
AATCGTGCCA ACGAATTCGA GCTACGCCTA AAGGGCGCTA CCTACGAGGA AATCGCCCGT
GCTGGCGGCG GCATTATTTC CACGGTTAAC GCCTGCCGTG AAGCCGATGA AGCCGAGTTA
TTTGATCTCG GTCGCCAGCG TTTAAACGCC TTGGCGAAGG AAGGCGTTAC TACGGTTGAG
ATTAAATCAG GCTATGGTTT AGATACCGAA ACCGAACTCA AAATCCTGCG TGTTGCCCGC
GAACTCGGCC AACATCACCA TGTGGATGTG AAGACCACCT TCCTCGGTGC CCATGCGGTG
CCGCCCGAGT TTAAAGACAA TAGCGACGGC TATGTCGACT TAATAATCAA TAAGATGCTG
CCTGCGGTGA TTGCCGAAAA CCTCGCCGAT GCGGTGGATG TATTCTGTGA AAACATCGCC
TTTAACCTAG AGCAAACCGA GCGCGTGCTG AGCGCCGCCA AAGCGGCTGG CCTGCAAGTC
AAACTGCACG CCGAGCAATT ATCCAATATG GGCGGCTCTG AATTAGCCGC ACGCTTAGGG
GCTAAGTCGG TTGATCATAT TGAATATTTA GATGAGGCTG GTGTTAAAGC CCTAAGTGAA
AGTGGCACCT GCGCCGTGCT GTTACCGGGC GCGTTTTACT TTTTGCGGGA AACCCAAAAA
CCACCTATCG ACTTATTGCG TCAATACGGT GTGCCTATGG TGCTCGCCAG CGACTTTAAT
CCCGGCTCAT CGCCCATCTG CTCGACCCTG CTGATGCTGA ACATGGGTTG CACCCTATTC
CGCTTAACCC CAGAGGAAGC GCTTGCGGGT TTAACATTGA ATGCCGCCAA GGCACTAGGG
ATTGAAGAGA GTGTCGGCAG CTTAGTGGTT GGTAAACAGG CGGATTTCTG TCTGTGGGAT
ATCGCCACCC CAGCACAACT CGCCTATAGC TACGGCGTGA ATCCCTGCAA GGATGTAGTT
AAAAACGGTA AGTTAGTGCA TCAATAA
 
Protein sequence
MSWDQVWIDV NVATMDPSIS APYGAITNAA IAVKDGKIAW LGPRSELPAF DVLSIPVYRG 
KGGWITPGLI DAHTHLVFAG NRANEFELRL KGATYEEIAR AGGGIISTVN ACREADEAEL
FDLGRQRLNA LAKEGVTTVE IKSGYGLDTE TELKILRVAR ELGQHHHVDV KTTFLGAHAV
PPEFKDNSDG YVDLIINKML PAVIAENLAD AVDVFCENIA FNLEQTERVL SAAKAAGLQV
KLHAEQLSNM GGSELAARLG AKSVDHIEYL DEAGVKALSE SGTCAVLLPG AFYFLRETQK
PPIDLLRQYG VPMVLASDFN PGSSPICSTL LMLNMGCTLF RLTPEEALAG LTLNAAKALG
IEESVGSLVV GKQADFCLWD IATPAQLAYS YGVNPCKDVV KNGKLVHQ