Gene Shewana3_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0096 
Symbol 
ID4478032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp107548 
End bp107976 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID639724616 
ProductMarR family transcriptional regulator 
Protein accessionYP_867747 
Protein GI117918555 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTA TTTCCCTCGG TGAAACCTTG CACAGATTAG TGCATGCCTA CAAAAAACAG 
CTGCGTGCGG ATATTGCTGC GCAGCAGATT GAATTACCTG TCACCCATAT TCGGGCGCTC
AAGGGGATTT GCCGTCATCC CGAGGCCACG GCGCAATCTA TTGCCCTACG CATGCAACGG
GATAAAGCTC AAATTACGCG GGTGCTCAAT GAGCTACAGC AGGCTGGTTA TATCCTAAAA
GTCGATAATC CTAAGGATGG CCGTAGCCAG TTATTGAGAC CGACGGCGCA GGGTGAGCAG
TTGATGACGC AAATTATTGC CGCCGAAAAA GCCACCGTTG CCCATATGAC CCAAGCACTC
GATCAGGATG AAATTGCGGT GTTTATCCGT ATTGCCAACC AGATCAGCGA TAGTGTGGCG
GAAAGCTAA
 
Protein sequence
MSAISLGETL HRLVHAYKKQ LRADIAAQQI ELPVTHIRAL KGICRHPEAT AQSIALRMQR 
DKAQITRVLN ELQQAGYILK VDNPKDGRSQ LLRPTAQGEQ LMTQIIAAEK ATVAHMTQAL
DQDEIAVFIR IANQISDSVA ES