Gene Shewana3_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0086 
Symbol 
ID4478022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp99057 
End bp99410 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content48% 
IMG OID639724606 
ProductMerR family transcriptional regulator 
Protein accessionYP_867737 
Protein GI117918545 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTG GTGCTGTGGC GAAGCAAACT GGCCTGTCGA TCAAGGCGAT TCGCCTCTAC 
GAGGAGTGGG GACTGATCAG TGCGCCGATC CGTAAGGGGC GTTATCGCAC TTATAGCGCA
ACCGATATAA AGCAGTTATT GCTGATCAAA GAGGCCAAAA CCTTAGGTAT CAAACTCTCG
CAACTTAAAG ACTTGTTTAC CGAGGGGGAG CAGGCGGCAC AGCTTGAGTC TGTGCAGCAG
TTTTTATTGA ATATCAAAGC CGATTTCCAG CGGCAGATTA GCGAATTAGA AGATAAATTA
GTCAGGCTCG ATGCCTGTAT TGATGGTTTG GATACCTGCG AATCCCGCGC CTAA
 
Protein sequence
MYIGAVAKQT GLSIKAIRLY EEWGLISAPI RKGRYRTYSA TDIKQLLLIK EAKTLGIKLS 
QLKDLFTEGE QAAQLESVQQ FLLNIKADFQ RQISELEDKL VRLDACIDGL DTCESRA