Gene Shewana3_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0082 
Symbol 
ID4478018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp97011 
End bp97421 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID639724602 
Productthioesterase superfamily protein 
Protein accessionYP_867733 
Protein GI117918541 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.691992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA CCGAATACAG CCTCGAAATC CACCCAAGAT TTACCGAAAC CGATGGTCTA 
GGCCATATCA ACAACACAGT GATCCCCGTG TGGTGCGAGG CGGCGCGCAC GCCAATCTTC
GAGATTTTTA ATCCCGAGTT GGATTTGCAT CAGTGGAACC TCATAGTGGC AGGCTTTACC
GTGGCCTTTA TCGCGCCGAC TTATTACGGC AAGAGCGTGA CGGTGAAAAC CTATGTCAGC
CGTATCGGCA ATAGCAGCTT CGAGCTGACT CAAACCTGTT GGCAAGCGGG TAATAAAACC
GCCGAAGTGA AAACTACCTT AGTGCACTAC GACTACAGCT GCGAAAAAAG CCGCCCCATC
CCCGAAGATA TTCGTGAAAT CCTGGCTAGC CTGAACGGCG AAGCTGCATA A
 
Protein sequence
MSVTEYSLEI HPRFTETDGL GHINNTVIPV WCEAARTPIF EIFNPELDLH QWNLIVAGFT 
VAFIAPTYYG KSVTVKTYVS RIGNSSFELT QTCWQAGNKT AEVKTTLVHY DYSCEKSRPI
PEDIREILAS LNGEAA