Gene Shewana3_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0081 
Symbol 
ID4478017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp94414 
End bp96903 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content49% 
IMG OID639724601 
ProductMORN repeat-containing protein 
Protein accessionYP_867732 
Protein GI117918540 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0420783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTT CGATTCGTCG TTTATGCGCC GCGGCTGGTG CGGTGTTGCT CTCTTCTTTT 
GCGGTTATTC CTGCTGCACT TGCGGCGGAA TATGACAAAA TGGTTCACGG TCCCGTGGAT
CTTCCCAATG GCCAATGGCT CAATTTTTAT CAAAAAGATC AACAGGTATG GGGCGAAATG
CTCTACGGCG ATGCGCCTGG TGTACGCATT GACGATTACG GCCGCGTCGA AATCGTGGCG
GTGTTTTACT ATGACTTCGA CAAGGGCGGC ACTAAAGAGG TGATCGTCAT GCTCAAGGAT
GCCGATGGCC AGCATCTACG GGGTTATGGT TTTGAGGGCG AGGAGTTGAC TAAACTGCCG
CGCCTGCAAG CCGTGCTCGA TGAAGTCGCA CCCACCATTA GCACCTTTAC CGTTGGCGGC
GTTCGCAAAG TTTTAAGCCA GTTACCACCG CAGCAGTACC GTATGACCTA TGAGGCTGAG
GGTGTCCAAG ATCCTGACAT TAAAGCGATT CTTGATGGTA CCTCTAAACT CAAACCGACC
TTAATTGGTT ATCGCAACTC TGAAGGCACG GCAACGGATG TAAAAACCGC AGTGGAATAC
AAGCTGCGCT ATCCCCTGAC TCGCACTGAT AAGGATGCCG AGGGGCGTGA ACGAAAATAC
AGTCTGGTGG CAACCTTTGA TCGCAGCGCC TACGTCGAAG AAGATAGCAG CTTTATGCTG
GTGGCCATTG GTTACGAGGC CGACGACATC GATTGGCTTA AAAATGGCAG CGAAAAAATC
CCGCGAACTG GGCCTTTTTA CGAATTCATG AGTATGGGCA GTACTTGGGC TGGCGTTGCC
AGTGAAGCCC ATTATGTGCA GGGTGAGCTT GATGGTCACT TTGCCGCCTA CGATGCCCGC
AATGGCAGTG TGATGTATGC CGGTGACTAT AAGCTGGGTA AGCAAGTGGG TAAGTGGATT
GAAGCCGACG GCCGTGAAAC CTATTGGGAA GGCGAGTACC TCGACGGCCA AAAGCAGGGT
AAATGGGTGT TGCAGTCCAT GATGGATGAC GCCGATAACT ACGGCTTTAT TCACTACAAC
AAGGGCGTGC CCGATGGCCC GAGTGAAGTC TATACCCCAG ATTACGATTC CAGTACCGAA
GGCGCGAAGA AGTTGTCCGA AAAGGGCATT TATCTCAATG GCGTAAAAGA TGGCGAGTGG
CTTGAGTCCG ATGGCAGCAA AGGCCAATAC CAAAAGGGCG TGAAACAAGG CGCTTGGGTG
GAAAAGGCCA CTCAAGGGGA CTATCGGTTT CAAACCGGTG AAGGCCGCTA CCTCGATGGT
AAACGTTCAG GTACTTGGGT CTATATTCGA ACGCCCGATG AGAACGATGC TTTTACCACT
AAGCAATCGG TGACTTATCT CTACAAGACC GAAGTCAACT ATGAGAATGG CCTACGCCAA
GGTGAGGCTA AGCTATTCAA TAAAGATAAT TTTATGTTCG CCCTTAAACA TTACGAAAAA
GGCCGCCTTC ACGGAGAAAG TCTATGGTAC TCAGCGCCAA ATATCGTCAG CAATGTTGCC
AATTATCGTC AAGGTGAGTT GGATGGCCCA CAAATGTGGC TCGAGCCTAA CGGCGATCTG
AATGAGTTGA GTCAGTATAA GTTTAATGAC GCCGTAACAC TTAAACCCTC GCAGGATGAA
TGCATGATGC GAAAAGAACC CTACGCAGGC GATTGTGAGG GGGTGTTAAA TTCAAAAAAT
GCTGAAACCA CTTCAATTAA GGATGGTGAG CAACGTGTAT ATCGTGGCGG CCGCCTATCC
GAATTAAGCT ATTACACTAA TGGGTCAGTC GATAAAGAAT ATCGATTCGA TTCTAACGGT
CGCTTAATGT CCCTGCAGAC TTATAAAGCG GGTCAGGAAT ACGGCCCAAG CATCCGCTAT
TCCACCGACG GCGGCTATTC GCTCGTGCAA TATGGTCATC TTATCAATAA CCGTCTTTCT
GGACCCCATT ACACTTTCTA CCCGAACGGC CAGTTAAAGA GCTTGTGGAA CTATTGCCAG
CAAGAAGGCG AAACCTGGAA CGGTGAACCC TATTTCTGGG ATAACGCCAT TGCGCGCTGT
GGTATCCAGC GGGAGTATTT TGATAATGGT GCCGTGAGTT GTATCGAGGA TCTCGACAGC
AATTATGCCG TGGATAAAGT CTGTTACGAC CAAAATGGTA AGTTAGCCAG CGAAATGCTG
CGTATCGATG AGCAACATGT GGTGCATAAG CGCTATATGA ACGGGGTTAT CTATCAAGAG
GAACCCGGAT TCTCGGATTT TTCCCATGTG ACCAAGGGGC GCAAAATCTA TCACTTAGAA
AACCCTAAAA GCCATGGTGT GTTTAAGTCC TACGACAGCA GTGGCAAGCT CAAATACGAA
AAAATATTCG ATATGGGTAA GGCTGGCTGT ATGAAAAAGT ACGATGCCAA TGGCAAGCAA
ACCCCAGAGA CCGCGAGTTG CCAGTTCTAG
 
Protein sequence
MELSIRRLCA AAGAVLLSSF AVIPAALAAE YDKMVHGPVD LPNGQWLNFY QKDQQVWGEM 
LYGDAPGVRI DDYGRVEIVA VFYYDFDKGG TKEVIVMLKD ADGQHLRGYG FEGEELTKLP
RLQAVLDEVA PTISTFTVGG VRKVLSQLPP QQYRMTYEAE GVQDPDIKAI LDGTSKLKPT
LIGYRNSEGT ATDVKTAVEY KLRYPLTRTD KDAEGRERKY SLVATFDRSA YVEEDSSFML
VAIGYEADDI DWLKNGSEKI PRTGPFYEFM SMGSTWAGVA SEAHYVQGEL DGHFAAYDAR
NGSVMYAGDY KLGKQVGKWI EADGRETYWE GEYLDGQKQG KWVLQSMMDD ADNYGFIHYN
KGVPDGPSEV YTPDYDSSTE GAKKLSEKGI YLNGVKDGEW LESDGSKGQY QKGVKQGAWV
EKATQGDYRF QTGEGRYLDG KRSGTWVYIR TPDENDAFTT KQSVTYLYKT EVNYENGLRQ
GEAKLFNKDN FMFALKHYEK GRLHGESLWY SAPNIVSNVA NYRQGELDGP QMWLEPNGDL
NELSQYKFND AVTLKPSQDE CMMRKEPYAG DCEGVLNSKN AETTSIKDGE QRVYRGGRLS
ELSYYTNGSV DKEYRFDSNG RLMSLQTYKA GQEYGPSIRY STDGGYSLVQ YGHLINNRLS
GPHYTFYPNG QLKSLWNYCQ QEGETWNGEP YFWDNAIARC GIQREYFDNG AVSCIEDLDS
NYAVDKVCYD QNGKLASEML RIDEQHVVHK RYMNGVIYQE EPGFSDFSHV TKGRKIYHLE
NPKSHGVFKS YDSSGKLKYE KIFDMGKAGC MKKYDANGKQ TPETASCQF