Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0076 |
Symbol | |
ID | 4478012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 88057 |
End bp | 89676 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724596 |
Product | TAP domain-containing protein |
Protein accession | YP_867727 |
Protein GI | 117918535 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000458817 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGATA GCATGATCCA CAGGAAGTCC CATAATGCCA GCGCTGACGT GGCAATGAAG CGCGTTGATA CTCGCCAGCA CTCGGGCAAG TTAAGCAAAA GCATCATCAG TTTGAGTGCG CTGATGCTCG CCATGGGTAG CGCCACGGCT TGGGCGAGCG ACAACTCAGT AAAGCCCACT GAATCCGCCA ACACCTGTTA TGTGGAGGGC GTGTCGGACC GCTTAAATTG CGGCTTTGTC ACTGTGCCCG AAAACCCTAA TAAGCCCGAT GGCAAACAGA TCCAAGTGCA TTATGTGGTC TTGCCCGCGG TGAAAAACGT CAACCACGAA GAGGCTTTAC TGGCGATCGC CGGCGGCCCA GGTCAATCGG CCATAGATAA CGCGGCAGGC TTCGATAGCA TGCTGAACAA AGTGCGCCAG CAGCGCGATA TTCTGCTAAT CGATCAACGC GGAACGGGGC GCTCCAATGT GCTCAATTGT GACGCAGGCC CACAATCGCC ACTGTCCTTC GACGATGATA ATGTCGATAC CTTGGCCGAA GCGCAAAAAT GCCGCGATCA ATTCCCCGAT ACTGATGTCA CCCAATATGG CAGCCTCAAT GCGGTGCAAG ACTTCGAAGC CGTACGCGCC CAGTTAGGCT ACAAAAAACT GCACCTCTAC GGTATCTCCT ACGGCACACG TATGGCACAG CTCTATATGC GCTTATATCC CGAGCACTTA GCCACAGTCA CCATAGACGG TATTGTGCCC ATGCAGCAGA GCGTATTGGA GATTGGCTCG GCGATTGAAC GTGGCTTTGA CTTGCTGTTT AAAGACTGCC AAGACACAGC CGCCTGCCAT GCCGAGTTTC CTGAGCTCAA GGCCGAGTTT GACCAAGTAG TCGCTAAACT CAGCCAAGGG CCAGTGATGG AGCAAGTGCA CGACCCAGTG ACGGGAGAAA AGACCCTACT CACTATGACG CGCTCAAAGT TTTACGGCGC GATCCGCATG GCGCTGTATC AAACCAATGT ACGCGCCTTA GTGCCCCATG CGATTCATCA GGCCGCTAAG GGTAACTACC AACCATTACT CGGGTTATTT GCCTTAACTA CGGATAATGC GGGTATGGCA ATGGGCATGC ACGCCTCAGT CGTCTGCGGT GAAGACATAC ATCGCATCAC CCCTGCGATG CGCGAACAGG CCAAAACCTC CTATGTTGGC AAAACCATGC TCGAAAGCTT AGAAGCATCG TGCTCTGTGT GGAAGGTGCC GCCAGTCGAT GCCAACTTTA GCGAGCCTAT CAAGAGTGAT ATCCCCACCC TGTTGCTATC GGGCGAAATT GACCCAGCAA CCCCACCGAG CTGGGGAGAA CTGGCGATGG AGAAACTCAC CAACGCCAAA CACTTTGTCG CACCTTATGC GACCCATGGT GTAGCCTATC AGTCCTGCGC CAATAACTTA GTCGCCGAGT TAGTGCGTAC TGGTTCGGTC AATGATCTCG ATGGTGAATG TTTGAAGAAG GATGTGCGCC GTAGCTTCTA TTTAAACGCC AGCTCGGTTG AGCCACTCGC AACCGAAGAT GCAACCCACT CTTCCAAAGA TAAGCCCAAG GATAAGCCCA GCACTGGAGC CAAGGAGTAA
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Protein sequence | MIDSMIHRKS HNASADVAMK RVDTRQHSGK LSKSIISLSA LMLAMGSATA WASDNSVKPT ESANTCYVEG VSDRLNCGFV TVPENPNKPD GKQIQVHYVV LPAVKNVNHE EALLAIAGGP GQSAIDNAAG FDSMLNKVRQ QRDILLIDQR GTGRSNVLNC DAGPQSPLSF DDDNVDTLAE AQKCRDQFPD TDVTQYGSLN AVQDFEAVRA QLGYKKLHLY GISYGTRMAQ LYMRLYPEHL ATVTIDGIVP MQQSVLEIGS AIERGFDLLF KDCQDTAACH AEFPELKAEF DQVVAKLSQG PVMEQVHDPV TGEKTLLTMT RSKFYGAIRM ALYQTNVRAL VPHAIHQAAK GNYQPLLGLF ALTTDNAGMA MGMHASVVCG EDIHRITPAM REQAKTSYVG KTMLESLEAS CSVWKVPPVD ANFSEPIKSD IPTLLLSGEI DPATPPSWGE LAMEKLTNAK HFVAPYATHG VAYQSCANNL VAELVRTGSV NDLDGECLKK DVRRSFYLNA SSVEPLATED ATHSSKDKPK DKPSTGAKE
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