Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0067 |
Symbol | |
ID | 4478003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 78662 |
End bp | 79882 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639724587 |
Product | major facilitator transporter |
Protein accession | YP_867718 |
Protein GI | 117918526 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.700351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000855622 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGTAAGTG ATTCAAATTC TGTAGAAAAT CGCCATCACA CTCGAATTAG AGTGCTGACG TATTTAATGT TTTTTATGTT CGCTATGACC TCAGATGCCG TGGGCGTGAT CATTCCTCAG CTGATTTCTG AGTTTGGCCT CTCTTTATCA CAGGCGAGCG CCTTTCATTA TATGCCGATG ATTTTTATTG CAATAAGTGG TCTATTCCTC GGTTTTTTGG CGGATAAAAT AGGGCGTAAA CTAACCATTT TATTAGGGCT GTTGTTGTTC GCCATTGCCT GTTTTTTATT TGCGCTTGGG GAGTCGTTTT ATTATTTCCT GCTGCTATTG GCCTTGGTGG GCTTGGCAAT AGGGGTATTT AAAACCGGGG CCTTAGCCCT GATCGGTGAT ATTTCTCGGT CGACAAAACA GCATTCCAGC ACCATGAATA CGGTCGAAGG TTTTTTTGGG GTCGGCGCCA TGGTGGGGCC AGCCATCGTC AGCTATCTGC TTATCAGTGG TGTGTCATGG AAGTATTTGT ATTTTGGGGC GGGTGTGTTT TGTCTGCTGC TCTGTTGGTT AGCGTTTAGG GCCGATTATC CGCAGGTTAA GCGATCTTCA ACGGAAACAA TTAATCTGAC GAATACCTTC AGTATGATGA AAAATCCTTA TGCATTAGGG TTTTCCCTTG CTATTGGTTT GTATGTGGCC ACCGAAGTGG CGATTTATGT ATGGATGCCT AGCTTGCTGC AAGAGTATCA GGGGGATTAC ACAGTACTTG CGGCCTATGC CTTGACCATC TTTTTTACCC TGCGAGCGGG TGGACGGTTT TTGGGTGGGT GGATATTAAA TCACTTTTCG TGGCAACAGG TTATGTTCTG GTTTAGCTTA GCGATCAGCC TTTGCTACCT CGGTTCAATG CTCTATGGCG TTGAGGCCGC TGTTATTCTC TTGCCCCTCT CAGGGCTGTT TATGTCAATG ATGTATCCCA CTTTAAACTC CAAGGGGATC AGTTGTTTCC CCGTGGCACA GCACGGCTCT GTGGCTGGAG TTATCCTGTT TTTTACCGCG GTTTCTGCGG CGTTGGCTCC CCTGTGCATG GGGTTAGTTG GGGATATTTT CGGCCATGTG AAGTATGGCT TTTACCTCGC AACCGGGTTT GCCGTTTTGT TGTGCCTGTT AGCGGGGGTT AATCTGATTA AAGATCCTTC TCAAGCTCTG TTAAGCCGTG AAACCGCTTG A
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Protein sequence | MVSDSNSVEN RHHTRIRVLT YLMFFMFAMT SDAVGVIIPQ LISEFGLSLS QASAFHYMPM IFIAISGLFL GFLADKIGRK LTILLGLLLF AIACFLFALG ESFYYFLLLL ALVGLAIGVF KTGALALIGD ISRSTKQHSS TMNTVEGFFG VGAMVGPAIV SYLLISGVSW KYLYFGAGVF CLLLCWLAFR ADYPQVKRSS TETINLTNTF SMMKNPYALG FSLAIGLYVA TEVAIYVWMP SLLQEYQGDY TVLAAYALTI FFTLRAGGRF LGGWILNHFS WQQVMFWFSL AISLCYLGSM LYGVEAAVIL LPLSGLFMSM MYPTLNSKGI SCFPVAQHGS VAGVILFFTA VSAALAPLCM GLVGDIFGHV KYGFYLATGF AVLLCLLAGV NLIKDPSQAL LSRETA
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