| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0064 |
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| Symbol | |
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| ID | 4478000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 74297 |
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| End bp | 75745 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724584 |
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| Product | major facilitator transporter |
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| Protein accession | YP_867715 |
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| Protein GI | 117918523 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000292111 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCTG CGTCTGCTTC GTCCCAACAT GAGCCTCTGC CCACCTCGGT TTTTCTGGCG
ATTTTTTCCG CCGTATTCTT GCCCATGTTT CTGGCAGCAG TCGATCAAAC CCTACTCGCT
ACCGCAACCC CTGCCATAGT GGAAGATCTT GGCGGCCTCA GGCAAGCCTC GTGGATCACT
ATCGGTTATA TGCTGGCGAT GGCGGCCAGT GTGCCTATTT ACGGCTGGCT AGGAGATAAC
TTTGGCCGCG CTAAAATCCT GATGATCGCC TTAGTGGTGT TTGCGTTGGG TTCAATCGTT
TCCGCCAGTG CCAGTACGAT GGACCATATG ATTGCCGGGC GGATCCTCCA AGGTCTCGGC
GGTGGCGGGC TGATGAGTCT GTCCCAATCC CTAGTGGGGG AATTAGTACC GATACGACAA
AGGGCACGTT TTCAGGGTTA TTTTGCCGCT ATGTTTACCC TCGCCAGTGT TGGCGGCCCT
GTGATTGGTG GCTTTGTGGT GCATGCCTAT TCTTGGCACT GGTTATTTTG GGCGAATATT
CCTTTGGTCA TGCTGGCGGT TTGGCGACTT AATCGCTTGC ATAAACAGAG TGTTAAACCG
GTGCGGCAAG GGCGGTTTGA CTTACTCGGC GTACTGTTAT TTCCCACGAT CATCACAGCG
CTGTTGTATT GGTTGTCTGT GGCGGGGCAA GACTTTGCTT GGCTATCGGC CACAAGCTTA
GGCTTTATGG GATTTATCTG TGTGGGCGCC CTTGTTCTGT TGTGGTGGGA GCGTCGGCGT
GAGAGTCCTT TCTTACCTCT GGATTTACTC GCCAATAAAG CCATTTATAT GCCGCTCTTC
ACGGCCGCGC TGTTTGCCGC CTGCCTGTTT GCGATGATCT TCTTTTTACC CATTTACTTG
CAGGTCGGTC TGCACACCAA TCCGGCCAAA ACGGGCTTGC TGCTGATGCC AATGACCTTT
GGCATTGTCA CAGGTTCCAC CATCGCTGGC AGGCTGTTGA GTCGGGATGT GGCGCCTAAA
TGGTTGCCGA CCTTCGGCAT GGGCTTAGCC TTTATCGGTT TGCTCTTAAT CGGTTTAGTG
CCGCCGAATG CGAATTTGAT TGGCGCTTTA GGTGTGCTGG TGGGCATTGG CTTAGGGACT
GTGATGCCCA GCGTGCAGCT AGTGGTGCAG AGCGTGTCGG GCAAGGCGCG TTTAAGCCAA
ATCACCGCCA TGGTGTCCTT GAGTCGTTCC ATGGGCGCGG CAATTGGTAC GGCTTTATTC
AGTCTGTTGC TATATGGCTT ATTGCCGCTT GACGGGGCGC AGGTGGGAAT TGCGGCAATA
AAGCAGTTAC CCATAGAGGT TGTGCATCAC GCCTTCCAAT GGGGTTTTAT CGCGGCGGCT
CTGGTGGCGC TCAGCTCGGC GATTGTGGGT TATCTCTCGC CTGCGACTGC GCTTAGGGAT
CATGAGTAG
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| Protein sequence | MTPASASSQH EPLPTSVFLA IFSAVFLPMF LAAVDQTLLA TATPAIVEDL GGLRQASWIT
IGYMLAMAAS VPIYGWLGDN FGRAKILMIA LVVFALGSIV SASASTMDHM IAGRILQGLG
GGGLMSLSQS LVGELVPIRQ RARFQGYFAA MFTLASVGGP VIGGFVVHAY SWHWLFWANI
PLVMLAVWRL NRLHKQSVKP VRQGRFDLLG VLLFPTIITA LLYWLSVAGQ DFAWLSATSL
GFMGFICVGA LVLLWWERRR ESPFLPLDLL ANKAIYMPLF TAALFAACLF AMIFFLPIYL
QVGLHTNPAK TGLLLMPMTF GIVTGSTIAG RLLSRDVAPK WLPTFGMGLA FIGLLLIGLV
PPNANLIGAL GVLVGIGLGT VMPSVQLVVQ SVSGKARLSQ ITAMVSLSRS MGAAIGTALF
SLLLYGLLPL DGAQVGIAAI KQLPIEVVHH AFQWGFIAAA LVALSSAIVG YLSPATALRD
HE
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