Gene Shewana3_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0062 
Symbol 
ID4477998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp72956 
End bp73693 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content50% 
IMG OID639724582 
Producthypothetical protein 
Protein accessionYP_867713 
Protein GI117918521 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000018824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACAG ACCCTGTTTT TTGGCTGGTG GCGATTCCTG CGGTGTTGAT CACTGGGATC 
TCTAAATCGG GTTTTGCCGG CGGCGTCGGT GGCCTGACCG TGCCTCTATT AGCGCTCGCC
ATAAGCCCGG CAACTGCTGC GGCAATCATG TTGCCATTGC TGATTTATAT GGATTTTTTA
AGTGTTCGCT CCTGGTGGGG CCAACATAAC CCTCGCCAAT TATGGATCCT TTTACCCGCG
GCGATAGTGG GCATAGGCAT AGCCTATTGG CTGTTCGACC GCTTAAACGA AGATTATTTA
CGGGCAATTT TAGGCTGTGT GTCCTTAGGT TTTGGTCTTT ATGGCTTGAT ATTAGGGGAT
AAAACCCAAG CAACGCCTTC GCCACTCGTG GGGCGGCTCT GCGGCTTAAC TGCAGGCTTT
ACCAGCTTTG TGGCCCATGC GGGCGGGCCG CCACTCAATG CCTATTTGCT GCCGTTACGC
TTGGCCAAGC CAGAGTTTTT AGCCACGGCA GTGGTATTTT TTGCGGTGGT GAATCTGGTT
AAGTTGGTGC CCTACAGTCT GCTCGGGCAA ATTAACCAAG GTAACATTCT GATTTCGCTA
TTACTTGCGC CTTTGGCTTG GTTAGGCGTA AAACTGGGGT TGGCGATTCA AGATAAGATC
AGCGATAGGT TGTTTAAACG CATCATCTTG ATTTTAATGG TGCTGGTGGG TATTCGTTTA
TTGTGGACGG CGTTATAG
 
Protein sequence
MLTDPVFWLV AIPAVLITGI SKSGFAGGVG GLTVPLLALA ISPATAAAIM LPLLIYMDFL 
SVRSWWGQHN PRQLWILLPA AIVGIGIAYW LFDRLNEDYL RAILGCVSLG FGLYGLILGD
KTQATPSPLV GRLCGLTAGF TSFVAHAGGP PLNAYLLPLR LAKPEFLATA VVFFAVVNLV
KLVPYSLLGQ INQGNILISL LLAPLAWLGV KLGLAIQDKI SDRLFKRIIL ILMVLVGIRL
LWTAL