| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0058 |
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| Symbol | |
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| ID | 4477994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 69187 |
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| End bp | 69885 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724578 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_867709 |
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| Protein GI | 117918517 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000170567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACATT TTACTGTCAT CGGATTAGGC CGCTTCGGCG TTGCCGCGAG CCTCGAACTC
ATCCACTTAG GCCACACGGT TACCGGTGTC GATAGCGACC CAAAAATCGT TGAAAAATAT
GTAGAAAGTC TTACAGAAGC GGTGATTTGC GACTGCGCCG ATGAGGCGTC GCTGCGCGAA
CTCGATCTGA CCAACTGCGA GGCCGTGCTG GTCGCTATCG GTGAGGATAT GCAGTCTAGC
CTGCTGTGCA CGCTGGCACT GAAAAACCTC GGCGTGCAGA CGATTTGGGT CAAGGCCAGC
ACCAAGGCGC ACCATACCAT AGTGTCGAAA CTCGGCGTTG CCCGTATTAT TCATCCCGAG
GAAGAAATGG GGATCCGCGT CGCCCAGTCG CTTAACTACC CTATGGTGAA TAACTTTCTC
GCCATCGGCG ATGGGCTTTA TATTGTTGAA ATCCATATTA AAGCCCAGTT ACATCACACC
ACTGTTGGCC AACTGCTCGG GAGCTTGCAG GAGCACAGCG CCGATGAGCA AACCAATGTC
CCACGCAATC CTAAGGGCAA GGTAGCGGCG CTGATGGTTA AGCGTGAGCA CAACGTATTT
AGCAAGATTG ATAGCGACTT TAGCCTGCAC ACAGAGGATG CCCTATTCCT CTGCGGTAGC
CGTGCCGAGT TAAAACAGCT CGCACCAAGG TTGGTGTAA
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| Protein sequence | MAHFTVIGLG RFGVAASLEL IHLGHTVTGV DSDPKIVEKY VESLTEAVIC DCADEASLRE
LDLTNCEAVL VAIGEDMQSS LLCTLALKNL GVQTIWVKAS TKAHHTIVSK LGVARIIHPE
EEMGIRVAQS LNYPMVNNFL AIGDGLYIVE IHIKAQLHHT TVGQLLGSLQ EHSADEQTNV
PRNPKGKVAA LMVKREHNVF SKIDSDFSLH TEDALFLCGS RAELKQLAPR LV
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