Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0054 |
Symbol | gpsA |
ID | 4477990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 63221 |
End bp | 64237 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724574 |
Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Protein accession | YP_867705 |
Protein GI | 117918513 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000141221 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACT CTGCCGATAT CACTGTGTTA GGGGCGGGCT CTTATGGCAC CGCCCTTGCC ATCTCTCTAG CCAGCAATGG TCATAAGACC TTGTTGTGGG GGCACGATCC TGCCCATATG CAAACGCTCG CTCAGGACAA ATGCAACCAA GCTTTCTTGC CTGGTATTGC CTTCCCCGAG TGTTTACATA TCGAAGCCGA CTTAGCCAAA GCCTTAGCGG CCAGCAATAA TGTGCTGGTT GTGGTACCTA GCCATGTATT TGGCTCGGTA CTGGCCCAAG CGAAACCTTT GTTACGCCAA GATGCTCGCA TCGTATGGGC GACCAAAGGA CTCGAGCCTG AAACCGGACG TTTGCTGCAA GATGTGGCCC GTGATGTGTT AGGCGAGCAA TATCCGCTGG CGGTATTGTC AGGACCGACG TTCGCGAAGG AATTAGCTAT GGGGTTACCT ACGGCGATTT CGGTTGCGGG TACTTGTCCC AAATTTACCG CTGAGCTAGT GGAATTGCTG CACAGCCCTA AACGTTTACG CGTTTATGCT AACGACGACT TTATCGGCCT GCAATTAGGC GGCGCGGTGA AGAACGTTAT CGCCATTGGT GCGGGCATGT CAGACGGTAT TGGCTTTGGT GCTAATGCCA GAACGGCGTT AATTACCCGT GGTTTAGTCG AGTTAACCCG CTTAGGCGAA GCCTTAGGTG CAAGTACCGC TACCTTTATG GGCATGGCTG GATTAGGCGA CCTAGTGTTA ACTTGTACCG ACAACCAATC CCGTAACCGC CGCTTTGGTT TAGCCTTAGG TAAAGGTTGC GATGTGGATA CCGCCCAGGC CGAAATCGGC CAAGTGGTTG AAGGTTATCG CAATACTAAA GAAGTGTTTA CTCTAGCGAA GCGCATGGGC GTCGAAATGC CGATCACCGA GCAAATCTAC CAAGTGTTAT ACCAAGGCAA AGCGCCCTTG GATGCCGCCA AAGAACTGCT CAGCAGAGAA AAGAAATCAG AAACGCCAGC GCAATAA
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Protein sequence | MKNSADITVL GAGSYGTALA ISLASNGHKT LLWGHDPAHM QTLAQDKCNQ AFLPGIAFPE CLHIEADLAK ALAASNNVLV VVPSHVFGSV LAQAKPLLRQ DARIVWATKG LEPETGRLLQ DVARDVLGEQ YPLAVLSGPT FAKELAMGLP TAISVAGTCP KFTAELVELL HSPKRLRVYA NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELTRLGE ALGASTATFM GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVDTAQAEIG QVVEGYRNTK EVFTLAKRMG VEMPITEQIY QVLYQGKAPL DAAKELLSRE KKSETPAQ
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