| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0043 |
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| Symbol | aroE |
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| ID | 4478915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 48638 |
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| End bp | 49516 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724559 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_867694 |
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| Protein GI | 117918502 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000585691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000012855 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAGATA TGCCCTCAGT AACTACGCCA GCGCTTGATC GATATGCCGT GTTTGGCAAT
CCGATAGGTC ACAGTAAATC GCCCTTTATT CATGGACAGT TTGCGTCTCT TACACAGCAG
ACTTTGAGTT ATGAAGCGAT TCTGGCGCCC ATAGATGGTT TTGAAGCGAG TTTACGAGCA
TTTTTTCAGG CGGGAGGAAA GGGCGCGAAT GTGACTGTGC CCTTTAAAGA GCAAGCCTTT
GCCCTCTGCG ACAGCTTAAG TGCCGAAGCG ACATTGGCGG GTGCGGTCAA TACTCTAAGC
TTGTTGGCCG ATGGCACTAT TTACGGTGAT AACACCGATG GTCTGGGGCT GGTGGCCGAT
CTTGTTCGCC ATCTCGGCAG TTTGCAGCAT AAGCGGGTAC TCTTGGTGGG GGCCGGCGGT
GCGGCGCGCG GCTGTATCTT GCCATTGCTC AAGGCTGAAG TCGGGCAATT GGTTATCACT
AACCGAACCC AAAGTAAGGC ACAGGCCTTA GTGGATATTT TCAGCCAAGT ACAAGAAGGG
CGCTACAGCG ATAAACTCCA GGCTGTATCG ATGTCAGAGT TGTCGGGGGT GTTCGATTTA
GTGATTAACT CGACCTCAGC GAGTCTAGCG GGAGAGTTAC CGCCACTGTC ACAGTCCATC
ATAGGCAACA AAACGGCTTG CTACGATATG ATGTATGGCG CCAAACCAAC AGCATTTAAT
CAATGGGCTT TGCAACAGGG TGCAGCGCAA GTGATTGATG GACTGGGTAT GCTTGTCGGT
CAAGCGGCGA AGAGTTTTGC ACTTTGGCGT GGCGTCGAGC CAGATACCTC AGGAGTGCTT
AAATTGCTCA GGGACAAACT GCAGGTCGAC GCGCAATAG
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| Protein sequence | MTDMPSVTTP ALDRYAVFGN PIGHSKSPFI HGQFASLTQQ TLSYEAILAP IDGFEASLRA
FFQAGGKGAN VTVPFKEQAF ALCDSLSAEA TLAGAVNTLS LLADGTIYGD NTDGLGLVAD
LVRHLGSLQH KRVLLVGAGG AARGCILPLL KAEVGQLVIT NRTQSKAQAL VDIFSQVQEG
RYSDKLQAVS MSELSGVFDL VINSTSASLA GELPPLSQSI IGNKTACYDM MYGAKPTAFN
QWALQQGAAQ VIDGLGMLVG QAAKSFALWR GVEPDTSGVL KLLRDKLQVD AQ
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