| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0037 |
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| Symbol | |
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| ID | 4478909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 44184 |
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| End bp | 45200 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724553 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_867688 |
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| Protein GI | 117918496 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000615281 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGTGG ACGACCTCAG GCAAAGATTG GAGCATGAGA GACACTCGCT CCCTTTGTCT
GACAATCTAC TCCATAGCCT AGTCATTGAT TATCAAAGGG TCGATGCAGC CCTCGAATGG
CAACAACAGT CTGAACTGCA TCACCTCGTT TGTTTTACCG ATCCCTTTTA TCCTCCATTA
CTTAAACAGT TACCCGATCC TCCAAGCGTC TTATTTATCA AAGGCTGTGT TGAGGCGCTG
TTGCTCCCCT CGCTCGCGAT AGTCGGGAGT CGTAATGCGT CTCCCGGTGG ATTACAGGTT
GCTTATCAGT TAGCTCGAGA GATGTCAGCG CTAGGATTTA GTATTTGCAG CGGCATGGCG
ATGGGGATTG ATGGCGCCGC CCATAAAGCG TGTGTTGACC ATGGAGGAAG AACGCTTGCC
GTGCTCGGAA CTGGGATTGA TATTATTTAT CCGCGTCGAC ATAAGCAGCT TTATGAGGAT
ATTCAGCACC AAGGCTGTAT AATAAGCGAG TTTTGGCCGG ATATAGGGCC ATTTGCGGGC
AATTTCCCGA AACGAAACCG CATTATTAGC GGTCTTTCTT TAGGTACGCT GGTGGTTGAG
GCTTGCCGTA AGAGTGGTTC ACTTATCACC GCTAGGTTGG CCATGGAGCA GGGGCGTGAG
GTCTTTGCTG TTCCGGGCTC GATTCTTGGC GGCTTTCATC AAGGCTGCCA TGATTTATTG
CGGGATGGGG CAAAACTTGT GGAGAGTGCG GCCGATATAG TGGAAGAGCT GGTAAGTTTG
ACGGCTTTTC ACCTTGAAGA AGTCAACACT CGCCACCATA TACAGCAAGG TGAGATTTGT
GATTTGCCAT TTTCATCGCT GTTAGCTAGT GTAGGTTATG AAACTACAAC AATTGATGCT
GTAGTCGAAC ATAGTGGGAA AACGATAGAT CTGGTGTTAG AACAAATGCT TGAACTTGAG
TTGCAAGGTT GGGTTGTTGC AGTACCCGGT GGTTACGTCA GAGTAAAGAG GAGCTAG
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| Protein sequence | MDVDDLRQRL EHERHSLPLS DNLLHSLVID YQRVDAALEW QQQSELHHLV CFTDPFYPPL
LKQLPDPPSV LFIKGCVEAL LLPSLAIVGS RNASPGGLQV AYQLAREMSA LGFSICSGMA
MGIDGAAHKA CVDHGGRTLA VLGTGIDIIY PRRHKQLYED IQHQGCIISE FWPDIGPFAG
NFPKRNRIIS GLSLGTLVVE ACRKSGSLIT ARLAMEQGRE VFAVPGSILG GFHQGCHDLL
RDGAKLVESA ADIVEELVSL TAFHLEEVNT RHHIQQGEIC DLPFSSLLAS VGYETTTIDA
VVEHSGKTID LVLEQMLELE LQGWVVAVPG GYVRVKRS
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