| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0031 |
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| Symbol | |
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| ID | 4479449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 37204 |
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| End bp | 38646 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724547 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_867682 |
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| Protein GI | 117918490 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000580956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000165872 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAACT TTAGACCGCT ATTGTTTATT TTGGGGCTGT TTCTGTCGAT GTTAACAGCC
TTTATGTTAG CGCCCCTGCT CCTTGCCGTG TTCAACGGTG AGGAAACCGT GGGCGCTTTC
ATGCTGTCGG CTTTAGTCAC TGGGATTTGC GCCAGCCTCT GTTTGCATAA CGGCCAGAGC
AAAACCATTA ACCTCAATAT TCGCGATATG TTTCTGCTCA CCAGCCTCAC TTGGCTGATC
GTGAGCCTGT TTGCCGCCAT GCCTTTTACC TTGTACCACG GCATTGGCTA TACAGACGCC
TTCTTCGAGA CCATGTCCGG CATTACCACC ACAGGTTCAA CCGTGCTCTC GGGCTTAGAT
ACTATGGACC ACAGTATCTT AATCTGGCGC TCGTTGTTGC AATGGCTCGG CGGTATCGGC
TTTATCGTGA TGGCGGTAGC GATTCTGCCC TTCTTAAACG TCGGCGGTAT GCGGCTGTTC
CGCACCGAGT CATCGGATTG GAGCGATAAG GCGGTGCCAC GCACCCAAAA CATGGCTAAG
CATCTCTTTT TTATCTATAT CTTGCTGACC GTGATGTGCT GTGTTGCCTA CCATCTTGCA
GGCATGACTT GGTTTCAAGC CATTAACCAT GCGATGACCA CACTGTCGAC GGGCGGCTAT
TCGACCTCAG ATAACTCGAT GGCGGCGTTT TCGAATTCGG CCCATTGGGT TGGCGTTGTG
TTTATGGCGG CGGGAGGCTT ACCCCTGCTG ATGTTTGTGC AGATGATCCA GCAGCGAGAC
TTTACCGTCT GGAACGATGC TCAAGTCAAA GGCTTCTTGT TTTTCCTCAC TTTTGTGTCT
TGTTTTATTG GCTTCTGGCT GTGGCAAACG CGGGATATCG CCCTTATCGA CGCACTGCGC
CTCTCCAGCT TTAACGTGGT TTCCGTGGTC ACCACCACAG GTTATGGTTT AACTGACTAC
GGCGCCTGGG GCGCGTTTGC GAATATCGCG TTTTTATTCT TAATGTTTGT CGGCAGCTGC
TCGGGCTCAA CCTCTGGCGG GATTAAAATC TTCCGCTTCC AAATTGCCGG CGCCATTATG
CGCGAGCAGT TAAAGCAGCA ATGCCATCCC AATGGCATCT TCCGGGAGCG CTATAACAAC
CGTTTGATCA GTGAAGATAT TGTGCGTTCA CTGATCACCT TTGTGCTGCT CTTTATGTTT
GTGATTGTTG GACTTTCGGT GATTCTGGTG CTGACTGGGC TAGACCCCAT GACCAGCTTT
ACCGGCGCTA TTACCGCAGT TACCAACGTT GGCCCAGGGC TTGGCCCCAT TATTGGCACA
GCGGGTAATT TCTCGACGCT GCCCGATTTG GCTAAATGGG CGCTTTCTTT GGGTATGTTG
CTCGGCCGCT TAGAGATTTT AACCGTAGCT GTACTGTTCC ATCCCAGCTT TTGGAAATAC
TAA
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| Protein sequence | MLNFRPLLFI LGLFLSMLTA FMLAPLLLAV FNGEETVGAF MLSALVTGIC ASLCLHNGQS
KTINLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQNMAK
HLFFIYILLT VMCCVAYHLA GMTWFQAINH AMTTLSTGGY STSDNSMAAF SNSAHWVGVV
FMAAGGLPLL MFVQMIQQRD FTVWNDAQVK GFLFFLTFVS CFIGFWLWQT RDIALIDALR
LSSFNVVSVV TTTGYGLTDY GAWGAFANIA FLFLMFVGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGIFRERYNN RLISEDIVRS LITFVLLFMF VIVGLSVILV LTGLDPMTSF
TGAITAVTNV GPGLGPIIGT AGNFSTLPDL AKWALSLGML LGRLEILTVA VLFHPSFWKY
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