Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0027 |
Symbol | |
ID | 4479445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 34058 |
End bp | 35515 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724543 |
Product | TrkH family potassium uptake protein |
Protein accession | YP_867678 |
Protein GI | 117918486 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0260602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000366479 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAATACA AAACCATAAT AAGAATCATA GGTCTACTTA TCGGCCTGTT CTCCATCACT ATGCTGCCGC CAGCCTTAAT CGCCATTTGG TATAACGATG GCGGTGGTAC TGCGTTTATT CAGGCATTTT TTGTCAGCTT ATTTATCGGT TTTTGGCTCT GGTATCCTAA TCGTCGCTGC AAAGAGGAAT TGCGAACCCG TGAGGGGTTT CTGATTGTGG TCCTGTTCTG GACCGTTCTT GGCTCCATCG GTGCTTTACC TTTTATCTTC TCAAGCCAGC CCGATCTCAG CTGGACCGAC AGTTTTTTCG AATCATTTTC CGCACTGACC ACCACGGGAG CCACAGTTAT TGTCGGACTG GACTCCTTGC CTAAGGCCAT TCTGTTTTAT CGACATATGC TGCAATGGCT CGGCGGTATG GGGATCATCG TTTTAGCCGT GGCGATTCTG CCTGTGCTGG GCGTTGGGGG CATGCAGCTG TATCGCGCCG AGATTCCTGG CCCTGTGAAG GACAGTAAGA TGACGCCGAG GATTGCCGAA ACGGCCAAGG CGTTATGGTA CATCTATCTA TTGCTAACCA TTGCCTGTGC TGGCGCTTAT TGGCTGGCGG GAATGAGCGT TTTCGATGCC GTGTGTCACT CGTTTTCGAC CATCGCTATC GGGGGCTTTT CGACCCACGA TGCCAGTATG GGATACTTCG ACAGCTCAGT GATCAACCTG ATTTGCGTGT TCTTTTTGAT TGTCTCTGCG GTGAACTTTA GCGTGCACTT TGCGGCATTT TCGCGTCGCG GGATCAATTT TAGAGTCTAT TTTCGAGATA CCGAGTTCAA AATGCTGGTG GCGATTCAGT TGGTGCTGAC GGCGATTTGC TTCTTAACCC TTTATCACTC AGGGATTTAT GACTCGCCAG AAGAAACCTT AGATCACGCC TTATTCCAAG CGGTTTCGGT GGCGACAACC GCCGGCTTTG GTACCGAAAG CTTCCATATG TGGCCGCTGT TCCTGCCGAT TCTGTTGATC TTCTCAAGCT TTATCGGTGG TTGTGGTGGT TCAACTGCGG GCGGGATTAA GGTGATCCGG GTTATCCTGC TGCTGTTACA AGGTTCACGC GAACTTAAAC GCCTTGTTCA CCCTAAGGCG ATGTTCTCGA TTCGTATCGG CTCCAAGGCA TTACCTGACC GGGTTGTCGA TGCCGTGTGG GGATTTTTCT CCGCCTATGC CTTAGTCTTC GTGCTGTGTA TGTTAGCGCT GATGGCTATG GGGCTAGATG ATATTACCGC CTTTAGTGCC ACGGCGGCCT GCTTAAATAA CCTCGGTCCG GGTCTTGGGG AAGTAGCAAG TAACTACGCC AGTATTGGTG ATGGTGCTAA ATGGGTGCTG GTGGTAGCCA TGTTATTTGG CCGCCTCGAA GTCTTTACCT TGCTGATTTT GTTCACGCCA ACTTTCTGGA GGGATTAA
|
Protein sequence | MQYKTIIRII GLLIGLFSIT MLPPALIAIW YNDGGGTAFI QAFFVSLFIG FWLWYPNRRC KEELRTREGF LIVVLFWTVL GSIGALPFIF SSQPDLSWTD SFFESFSALT TTGATVIVGL DSLPKAILFY RHMLQWLGGM GIIVLAVAIL PVLGVGGMQL YRAEIPGPVK DSKMTPRIAE TAKALWYIYL LLTIACAGAY WLAGMSVFDA VCHSFSTIAI GGFSTHDASM GYFDSSVINL ICVFFLIVSA VNFSVHFAAF SRRGINFRVY FRDTEFKMLV AIQLVLTAIC FLTLYHSGIY DSPEETLDHA LFQAVSVATT AGFGTESFHM WPLFLPILLI FSSFIGGCGG STAGGIKVIR VILLLLQGSR ELKRLVHPKA MFSIRIGSKA LPDRVVDAVW GFFSAYALVF VLCMLALMAM GLDDITAFSA TAACLNNLGP GLGEVASNYA SIGDGAKWVL VVAMLFGRLE VFTLLILFTP TFWRD
|
| |