Gene Shewana3_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0026 
Symbol 
ID4479444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp33366 
End bp33980 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID639724542 
Producthypothetical protein 
Protein accessionYP_867677 
Protein GI117918485 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0810004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000252745 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCGAAA GTTATCTGAT ACCGAGTGAA AGTGTGCAGA TAGAAGAAGA GATAAAGCAT 
AGCCGCTTTA TCTCTTTTCT ATTTCATTGC ACGAGTTTAG AACAACTGAA GTTAGTACTT
ACTGACATAA AGCGAGATTA TCCCGGCGCC AGTCATTACT GCTATGCCTT TATCGCAGGA
GCGCCTAACG ACAGCATTGC CATCGGTTCG AGTGACGATG GTGAGCCTGC GGGCAGCGCT
GGTCGTCCAA TGCTCGCAGT ATTACAAGGC GCGAATCTCG GTGAAGTCGG TGCCGTGGTC
GTGCGTTTCT ATGGCGGTAC TAAGTTAGGC GTGGGCGGTT TAGTGCGTGC CTATACCTCG
GGATTACGCC AAGGTTTAGG GCAATTGCCG ACGCGAGTAA AGCAATTACG TTATCCGGCA
AAACAGCATT GTGATTACAC TCAATTAAGG GATGTTGAGC ATCTACTGCA GCAGTTAGAA
GCGGTGATCA TCGATAAGCA ATTTGCCGAA GCCGTTGATA TCCATTTTGA AATAGGCAAA
CAGCAGCAGG GCATATTGAA TGAATCGCTG GCAACTTTGA GTCAGGGCAG CCTGCGCGCA
GAGTTTGAGC TGTGA
 
Protein sequence
MLESYLIPSE SVQIEEEIKH SRFISFLFHC TSLEQLKLVL TDIKRDYPGA SHYCYAFIAG 
APNDSIAIGS SDDGEPAGSA GRPMLAVLQG ANLGEVGAVV VRFYGGTKLG VGGLVRAYTS
GLRQGLGQLP TRVKQLRYPA KQHCDYTQLR DVEHLLQQLE AVIIDKQFAE AVDIHFEIGK
QQQGILNESL ATLSQGSLRA EFEL