Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0026 |
Symbol | |
ID | 4479444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 33366 |
End bp | 33980 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639724542 |
Product | hypothetical protein |
Protein accession | YP_867677 |
Protein GI | 117918485 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0810004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000252745 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTCGAAA GTTATCTGAT ACCGAGTGAA AGTGTGCAGA TAGAAGAAGA GATAAAGCAT AGCCGCTTTA TCTCTTTTCT ATTTCATTGC ACGAGTTTAG AACAACTGAA GTTAGTACTT ACTGACATAA AGCGAGATTA TCCCGGCGCC AGTCATTACT GCTATGCCTT TATCGCAGGA GCGCCTAACG ACAGCATTGC CATCGGTTCG AGTGACGATG GTGAGCCTGC GGGCAGCGCT GGTCGTCCAA TGCTCGCAGT ATTACAAGGC GCGAATCTCG GTGAAGTCGG TGCCGTGGTC GTGCGTTTCT ATGGCGGTAC TAAGTTAGGC GTGGGCGGTT TAGTGCGTGC CTATACCTCG GGATTACGCC AAGGTTTAGG GCAATTGCCG ACGCGAGTAA AGCAATTACG TTATCCGGCA AAACAGCATT GTGATTACAC TCAATTAAGG GATGTTGAGC ATCTACTGCA GCAGTTAGAA GCGGTGATCA TCGATAAGCA ATTTGCCGAA GCCGTTGATA TCCATTTTGA AATAGGCAAA CAGCAGCAGG GCATATTGAA TGAATCGCTG GCAACTTTGA GTCAGGGCAG CCTGCGCGCA GAGTTTGAGC TGTGA
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Protein sequence | MLESYLIPSE SVQIEEEIKH SRFISFLFHC TSLEQLKLVL TDIKRDYPGA SHYCYAFIAG APNDSIAIGS SDDGEPAGSA GRPMLAVLQG ANLGEVGAVV VRFYGGTKLG VGGLVRAYTS GLRQGLGQLP TRVKQLRYPA KQHCDYTQLR DVEHLLQQLE AVIIDKQFAE AVDIHFEIGK QQQGILNESL ATLSQGSLRA EFEL
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