| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0022 |
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| Symbol | |
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| ID | 4479440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 26815 |
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| End bp | 28026 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639724538 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_867673 |
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| Protein GI | 117918481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.585928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000315771 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCAAA CGGAACAAAC GCTTTTCGAA CAAATGCGGA TCACTGAGCT TGAGATTGAT
TTTCGCAAGT CCTTGTTCTC TTTTACCTTA GCCGATGTCA GAGCACTGCA ATCCTTCAAA
CCTGTGATTG AAGAGAACAT AGATAAAATC GTTGATGACT TTTACGGTCT ACAAACCAGT
GTGTCCGAGA TTGCTCTGCT GATCGGAGAC TCCGATACCC TAGCTCGTTT ACGTACCGCA
CAGAGACGTT ATGTGCTCGA CCTGTTTAAT GGTGTGTACG ATTTAGAATA TGTAAACAAC
CGCCTGCGGA TTGGATTGGT ACATAAGCGT ATCGGCGTTG AACCTAAACT CTACCTTTCT
GCCGTTCATA CTCTAAAAGA GTTGATTTAT GCCGAGATAA ATAACTCGGT TGCTGATGAC
TTGCAAAATG AACGCATTCG AGTCGCCATA GATAAACTTG TTCTCTTCGA CGTCACCCTC
GTCTTCGATA CCTATATTCG AAGCCTAGTA TCCGAAATTG AGAACGCCAA AGACAAGGCT
GAACGTTACG CACAGAGCAT GGAGAGCAAA GTCAAAGAAC GTACACAACA GCTCGAAGAA
TTATCTCAAA CCGACCCGTT AACGGGGCTA TTAAATGTGC GACACCTGCA AGAAATTGGC
ACTCGCATTT TAAGAGCAGC TCAGAGACGA GCCGAACCAG TTAGCGTAAT CTACTTAGAT
GTTGATGATT TCAAATCCTT TAATGATACC CAAGGCCATC GCTCTGGAGA CGAAGTGCTT
TGCGCCGTCG CGCAGGCCAT CAAAGAAAGC ACCCGCGTAG AAGATCATAG TTTTCGCTAC
GGTGGCGATG AGTTCTGCAT CATCATGCCC AATTGTCGAG AAGACCAAGC CAGAGACAAC
TTTATCGAGC GCTTTAATCA GAATATTAAA CTGCACCTAA ACAACATCTC CCTCAGTTAC
GGTATTGTTG ATACAGGCCC CTATGATTAC GATGATGCCA ATACCTTGAT CCATAAAGCG
GATCAAAAAA TGTATAGCTA TAAACGTGCT GCCAAGTTGC AGCAGCAAGG CTCAGTGTCG
ATTGCGGCAA ATGATATAAA ATCCGATATG CCTCAGTCCG CTTCTCAAGT AGGAACACCC
CAAGCAGCAA TTACGCCAAC CATAGTGCAT AGCATTCAAC AACCTCAGGG AATAAACAAA
GTTGCCGAGT AA
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| Protein sequence | MLQTEQTLFE QMRITELEID FRKSLFSFTL ADVRALQSFK PVIEENIDKI VDDFYGLQTS
VSEIALLIGD SDTLARLRTA QRRYVLDLFN GVYDLEYVNN RLRIGLVHKR IGVEPKLYLS
AVHTLKELIY AEINNSVADD LQNERIRVAI DKLVLFDVTL VFDTYIRSLV SEIENAKDKA
ERYAQSMESK VKERTQQLEE LSQTDPLTGL LNVRHLQEIG TRILRAAQRR AEPVSVIYLD
VDDFKSFNDT QGHRSGDEVL CAVAQAIKES TRVEDHSFRY GGDEFCIIMP NCREDQARDN
FIERFNQNIK LHLNNISLSY GIVDTGPYDY DDANTLIHKA DQKMYSYKRA AKLQQQGSVS
IAANDIKSDM PQSASQVGTP QAAITPTIVH SIQQPQGINK VAE
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