Gene Shewana3_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0020 
Symbol 
ID4479438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp25944 
End bp26381 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID639724536 
ProductMOSC domain-containing protein 
Protein accessionYP_867671 
Protein GI117918479 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.606276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000172861 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAAAC TAGTTGCTAT CGCCTACAAA ACGGTTAAAC GCGGGCCAAT GAACGAAGTG 
CTGTGCGCGA ATGTCACTCA GCACAGTGGT GTCGAAAAAG ATGTATTTGG TCGCCCGGGT
AAACGTCAAG TCACAGTACT GTCGCTGCAA CAGTGGCAAA TAGCTTGTCA GAGCATAGAT
GCAAATTTAC CTTGGACGAC TCGTCGAGCA AATCTATTAG TCGACGGCTG TAGTTTTGGG
GATGCGGATG TGGGTAAGCA GCTGCGCATT GGTGATCTCT GCCTCGAAGT GACGGGTGAG
ACTGCTCCCT GCAAGAAGAT GGAACTGGCT CATGCTGGCT TGGAATCCGC CCTTACTCCC
GATTGGCGAG GCGGCGTCAC TTGTCGCGTC ATCAATGACG CCATGATCCA TATAGGTGAT
CCCGTTACAT TAGACTAA
 
Protein sequence
MPKLVAIAYK TVKRGPMNEV LCANVTQHSG VEKDVFGRPG KRQVTVLSLQ QWQIACQSID 
ANLPWTTRRA NLLVDGCSFG DADVGKQLRI GDLCLEVTGE TAPCKKMELA HAGLESALTP
DWRGGVTCRV INDAMIHIGD PVTLD