| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0016 |
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| Symbol | glyS |
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| ID | 4477455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 18813 |
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| End bp | 20879 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724532 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_867667 |
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| Protein GI | 117918475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000327788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTG AAAACTTACT CATCGAGTTA GGCACTGAAG AACTGCCGCC AAAGGCGCTG
CGTAAACTGG CTGAGTCTTT CTTAGCGAAT TTTACCGAAG AATTAACCAA AGCCGATTTA
GCTTTTAAAT CAGCTGTTTG GTATGCAGCA CCCCGTCGTC TCGCCATTAA TGTGACAGAA
CTAGCACTTG CTCAAGCGGA CAAAATCGTT GAAAAACGCG GCCCAGCTGT CAGCTCAGCA
TTCGATGCCG AAGGTAAACC AACGAAAGCC GCAGAAGGTT GGGCACGTGG TAACGGTATT
ACCGTTGACC AAGCCGAGCG TTTAGTGACC GATAAAGGTG AATGGCTGGT TTATAACGCC
AAAGTCGAAG GCGTTGAAAC CAAAAGCTTA ATCGCTGCGA TGGCGCAACG TGCGCTGGAT
AAGTTACCCA TTCCTAAGCC AATGCGCTGG GGAAGCAGCA AGACACAATT CATTCGCCCT
GTTCACACAG CCACTATGCT GTTAGGCAGT GAGTTAATCG AAGGTGAATT ACTTGGCATT
AAATCGGCAC GTAATGTTCG TGGTCACCGC TTTATGGGTA CAGGCTTCGA GCTTGACCAT
GCAGACAACT ACCTGACGCT ACTGAAAGAA AAAGGTAAAG TCATCGCCGA TTACGAAAGC
CGTAAAGCCT TAATTAAAGC CGATGCAGAA AAAGCGGCCG CTAAGATTGG TGGCACCGCA
GATATCGAAG ATGACCTGCT GGAAGAAGTC ACCTCTTTGG TTGAATGGCC AGTCGTATTA
ACCGCAAGCT TTGAAGAGAA GTTCTTGAAC GTGCCTTCAG AAGCCTTGGT TTATACGATG
AAGGGCGATC AGAAATACTT CCCAGTGTTC GATGATGCAG GTAAGTTACT GCCAAACTTC
ATCTTTGTCG CTAACATAGA ATCAAAAGAT CCGGCACAAA TTATTGCGGG TAACGAGAAG
GTGGTTCGTC CACGCTTGGC CGATGCCGAG TTCTTCTTCA ATACCGACAA AAAGCACACG
CTGGAATCAC GCTTACCGAG TCTTGAGACC GTCTTGTTCC AACAACAACT AGGTACTTTA
AAAGACAAAG TCACTCGTAT CTCTGCCCTA GCCGCCTTTA TTGCCGAGCA AACTGGCGCT
AACGCCGTTG ATGCAGCCCG TGCTGGTTTA TTGTCTAAAA CAGACTTAAT GACCAATATG
GTGATGGAGT TTACCGATAC TCAAGGCACT ATGGGCATGC ATTACGCCCG CCTAGATGGT
GAAACTGAAG CCGTCGCCTT AGCCATGGAA GAGCAATACA AGCCAAAATT CTCTGGCGAT
ACAGTTCCTA CTGCAGCGGT ATCTTGCGCA GTAGCCTTAG CGGATAAACT CGATACCTTA
GTCGGTATCT TCGGTATTGG TCAGGCACCT AAGGGCGCTG CCGACCCATT CGCACTGCGC
CGCGCCGCTA TCGGTGTGCT ACGCATTATC GTTGAGAACA AGTTGCCACT AGACTTAGTG
ACCCTGATTG CCAAGGCTCA AGAACTCCAT GGCACTAACT TAAGCAACGC GAATGCAAGC
GATGAAGTGC TTGAGTTCCT AATGGCGCGT TTCCGCGCTT GGTACCAAGA TAAAGGTATC
GAGGTTGACG TGATCCTCGC CGTATTAGCA CGTCGCCCAA CTCGCCCAGC TGATTTTGAT
AGCCGTATCA ATGCGGTATC ACACTTCAGA AGCTTAGAAG CCTCTAGCGC TCTGGCAGCG
GCGAATAAGC GTGTGTCTAA CATTCTGGCG AAAGTGGAAG GCGAATTACC CACCACGATT
AACTCAGCTC TGTTAGCCGA AGCCGCAGAA CAAGCATTAG CCGCTAAGCT TGCCGAACTG
CAGCCTCAAC TCGCTCCGCT GTTCGCTAAT GCTGATTACC AACAGGCATT AACACTGCTG
GCGAGCTTAC GTGAAAGCGT TGACCAGTTC TTCGAAGACG TGATGGTTAT GGCGGACGAC
GAAGCATTGA AAAACAACCG CTTAGCTCTG CTAAATAACC TACGTGAACA GTTCTTACAT
GTAGCGGATA TTTCTCTGCT TCAGTAA
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| Protein sequence | MNFENLLIEL GTEELPPKAL RKLAESFLAN FTEELTKADL AFKSAVWYAA PRRLAINVTE
LALAQADKIV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVDQAERLVT DKGEWLVYNA
KVEGVETKSL IAAMAQRALD KLPIPKPMRW GSSKTQFIRP VHTATMLLGS ELIEGELLGI
KSARNVRGHR FMGTGFELDH ADNYLTLLKE KGKVIADYES RKALIKADAE KAAAKIGGTA
DIEDDLLEEV TSLVEWPVVL TASFEEKFLN VPSEALVYTM KGDQKYFPVF DDAGKLLPNF
IFVANIESKD PAQIIAGNEK VVRPRLADAE FFFNTDKKHT LESRLPSLET VLFQQQLGTL
KDKVTRISAL AAFIAEQTGA NAVDAARAGL LSKTDLMTNM VMEFTDTQGT MGMHYARLDG
ETEAVALAME EQYKPKFSGD TVPTAAVSCA VALADKLDTL VGIFGIGQAP KGAADPFALR
RAAIGVLRII VENKLPLDLV TLIAKAQELH GTNLSNANAS DEVLEFLMAR FRAWYQDKGI
EVDVILAVLA RRPTRPADFD SRINAVSHFR SLEASSALAA ANKRVSNILA KVEGELPTTI
NSALLAEAAE QALAAKLAEL QPQLAPLFAN ADYQQALTLL ASLRESVDQF FEDVMVMADD
EALKNNRLAL LNNLREQFLH VADISLLQ
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