Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0010 |
Symbol | |
ID | 4477449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 11054 |
End bp | 12154 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724526 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_867661 |
Protein GI | 117918469 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000642144 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000134313 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATTTT CAATTGATAG GGACGCCCTA TTAAAGCCGC TTCAATTGGT TTGTGGTGCG GTAGAAAGAC GCCATAACTT GCCTATTTTG GCAAATCTCC TTGTAGAAGT TAGTGGTCAC TCACTCAAAA TGACAGGTAC CGACCTCGAA GTTGAGTTAG TGGGCCAGGC GGTCATTCAT GGTGATATCG AAGAAGGTCG TACAACAGTT CCTGCTAAGA AACTGTTAGA TATAGTTAAA TCCTTACCCG AGCAAAGCGA GCTTAAGGTC GAGCAACAAG ATAACAAATG GTTATTACGC TCTGGCCGTA GCCGTTTCTC GCTGGCAACC CTGCCCGCAG AAGAATACCC CAATGTGGAA GCCTTTCAGG CGGAAATCGA ATTCACCCTT AAGCAAGGCG TGCTGAAGTC ACTGATTGAT GCGACTCAGT TTTCGATGGC GAACCAAGAC GTTCGTTACT ATCTGAATGG TTTATTGCTC GAAACCGAAG GTAATGTGCT GCGTGCCATT GCTACCGATG GTCACCGCTT AGCCTTAAGT CACAGAACTA TTGATGCGCA ATTGCCTGAA AAACAAGTGA TCGTGCCCCG TAAAGGCGTG ATGGAAATGG CGCGTTTGTT GGAAGCCGAT GATTTAGATA TCGCAATTGC CATTGGTGAT AATGCGATTC GTGCGACCAC CAGCACCACA GTTTTTACCA GTAAATTAGT CGATGGTCGT TTCCCCGATT ATCGCCGTGT GTTACCTAAG GGCGGTGATA AAATCGTTAT CGCCAGCCGT AACCACTTCA AACAAGCCTT AACCCGTGCT TCTATTTTAT CGAATGAGAA GTTTCGCGGT GTACGCATTC AGTTAGAAGC GGGATTACTG AAAATCACCG CCAATAACCC TGAGCAGGAA GAAGCGGAAG AAATCATCGA TGTGGATTAC AACAATCAGC CACTCGAAAT TGGTTTCAAC GTCAGTTACT TATTGGATGT GTTAAACAAC CTTAAGTCCG ATGATGTGCG TATCACCTTA ATCGATGGTA ACTCGAGTGC CTTATTGGAA AACCACCTGG AAGAAGATTC CATGTATGTG GTTATGCCGA TGCGCTTATA G
|
Protein sequence | MKFSIDRDAL LKPLQLVCGA VERRHNLPIL ANLLVEVSGH SLKMTGTDLE VELVGQAVIH GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE AFQAEIEFTL KQGVLKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS HRTIDAQLPE KQVIVPRKGV MEMARLLEAD DLDIAIAIGD NAIRATTSTT VFTSKLVDGR FPDYRRVLPK GGDKIVIASR NHFKQALTRA SILSNEKFRG VRIQLEAGLL KITANNPEQE EAEEIIDVDY NNQPLEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALLE NHLEEDSMYV VMPMRL
|
| |