Gene Shewana3_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0009 
SymboldnaA 
ID4477448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp9651 
End bp11033 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content46% 
IMG OID639724525 
Productchromosomal replication initiation protein 
Protein accessionYP_867660 
Protein GI117918468 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000281375 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000600935 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCGGTTT CACTTTGGCA ACAATGTATC GGAAGACTGC AAGACGAGCT TTCTGCTCAG 
CAGTTCAGTA TGTGGATCAG ACCGTTACAA GCCGAAATGG ATGGAGATAC TTTGGTGCTT
TATGCGCCTA ACCGCTTCGT GCTCGATTGG GTTAGGGATA AGTACATCAA TATCATTAAT
CAGTTTTTTA CTGAGCAAAT GGGTAATGAT GCACCTAAGT TACGCTTCGA TATCGGTAGC
CGTCCGTCAG CGAAAAAGCC TGAGCCAGCT CCAGTTGCGG CTGTGCGTGT GCCTAATCCC
CAAACTAAAG CTTCAGTAGG GACTTCATTT AATACCACTG AGCCTGTTGC TAACGCTAAT
CATCGCAGCA ATATCAATCC CACTTACCAA TTCGACAACT TCGTTGAGGG TAAGTCTAAC
CAACTCGGTA AAGCGGCCGC TCTGCAGGTT GCTGAAAATC CGGGTGGTGC CTATAACCCG
CTGTTCCTTT ATGGTGGTAC GGGTTTAGGT AAGACCCACT TATTACATGC AGTCGGTAAC
GGCATCATCA AAAATAATCC CGATGCGAAA GTTGTGTACA TGCACTCCGA GCGTTTTGTG
CAAGACATGG TGAAAGCGCT ACAAAACAAT GCGATCGAAG AGTTCAAACG TTACTACCGC
AGTGTCGATG CCCTGTTTAT CGACGATATT CAATTCTTCG CCAATAAAGA CAGATCGCAG
GAAGAATTTT TCCATACCTT TAACGCGTTG CTTGAAGGTA ATCATCAGAT CATCCTGACA
TCGGATCGTT ATCCTAAAGA GATCGACGGG GTAGAGGACA GATTAAAATC TCGCTTTGGT
TGGGGCTTAA CGGTTGCGAT TGAACCGCCA GAGCTTGAAA CCCGTGTGGC GATTTTGATG
CGTAAAGCCC AAGAGAGCGG TATCAATCTT CCCGACGAAG TCGCCTTCTT TATTGCTAAG
CGCTTACGTT CGAACGTTCG CGAGTTAGAA GGGGCGTTAA ACCGCGTTAT CGCGAACGCT
AACTTTACTG GCCGCCCAAT TACAATTGAT TTTGTGCGTG AAGCCCTGCG TGACCTCTTG
GCACTGCAGG AAAAATTAGT CACTATAGAC AACATTCAGA AAACCGTAGC TGAATACTAC
AAAATCAAGA TGGCTGATAT GTTGTCTAAG CGTCGTTCGC GCAGTGTTGC GCGCCCTAGA
CAAGTGGCCA TGGCGTTATC CAAAGAATTA ACTAACCAGA GCTTGCCGGA AATTGGTGAT
GCCTTTGGTG GTCGAGATCA CACCACAGTG TTACATGCCT GTCGTAAGAT TGCTCAGCTA
CGGGAAGAGA GTCACGACAT TAAAGAAGAT TATGCTAACT TGATTAGAAC CTTATCTTCT
TAA
 
Protein sequence
MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AEMDGDTLVL YAPNRFVLDW VRDKYINIIN 
QFFTEQMGND APKLRFDIGS RPSAKKPEPA PVAAVRVPNP QTKASVGTSF NTTEPVANAN
HRSNINPTYQ FDNFVEGKSN QLGKAAALQV AENPGGAYNP LFLYGGTGLG KTHLLHAVGN
GIIKNNPDAK VVYMHSERFV QDMVKALQNN AIEEFKRYYR SVDALFIDDI QFFANKDRSQ
EEFFHTFNAL LEGNHQIILT SDRYPKEIDG VEDRLKSRFG WGLTVAIEPP ELETRVAILM
RKAQESGINL PDEVAFFIAK RLRSNVRELE GALNRVIANA NFTGRPITID FVREALRDLL
ALQEKLVTID NIQKTVAEYY KIKMADMLSK RRSRSVARPR QVAMALSKEL TNQSLPEIGD
AFGGRDHTTV LHACRKIAQL REESHDIKED YANLIRTLSS