| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0001 |
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| Symbol | gidB |
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| ID | 4477440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 39 |
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| End bp | 659 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639724517 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_867652 |
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| Protein GI | 117918460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.895325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000116578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGTTATCTG CCCAGTTAGA GGCCTATTTA GCCGAAATTA ATCTGCCCGC CACGGCTGAG
CAGAAAAAAC AACTGCTTGA TTTTGTTGGC ATGCTCAACA AATGGAATAA AGCCTATAAC
CTAACTTCGG TAAGAGATCC TGAGGCGATG CTTGTCCGTC ATATCATGGA CAGCTTAGTG
GTGTCGCCCC ATTTGCAGGG TGAGCGCTTT ATCGATGTAG GTACTGGCCC TGGGCTGCCC
GGCATTCCCT TAGCGATTAT GAATCCAGAT AAAACCTTTG TGCTGCTCGA TAGCTTAGGC
AAACGTATCC GTTTTCAAAA GCAAGTGGCC TTTGAACTCG GGATCCACAA TATTAGTTCG
ATAGAAAGCC GAGTCGAGGC CTATCAACCC GAGCAAAAGT TCGATGGAGT GCTCAGCCGC
GCCTTTGCCT CAATCCATGA TATGTTGACA TGGTGCCATC ACTTGCCTGC CGAGCATGGA
CAATTTTATG CGCTCAAGGG ACTACTGAGT GATGAAGAGA TGCAACAAAT CCCCGCTGGA
TTTGTGGTGA CCGAAACCAT CGAACTCCAA GTGCCTAGAC TCGATGAGCA AAGACATTTA
CTCAAAATAA TCAAAGAATA A
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| Protein sequence | MLSAQLEAYL AEINLPATAE QKKQLLDFVG MLNKWNKAYN LTSVRDPEAM LVRHIMDSLV
VSPHLQGERF IDVGTGPGLP GIPLAIMNPD KTFVLLDSLG KRIRFQKQVA FELGIHNISS
IESRVEAYQP EQKFDGVLSR AFASIHDMLT WCHHLPAEHG QFYALKGLLS DEEMQQIPAG
FVVTETIELQ VPRLDEQRHL LKIIKE
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