| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_R0003 |
|---|
| Symbol | |
|---|
| ID | 4481695 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 275258 |
|---|
| End bp | 276753 |
|---|
| Gene Length | 1496 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640720015 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0041999 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGAGTTGATC CTGGCTCAGA ACGAACGTTG GTGGCATGCT TAACACATGC AAGTCGAACG
GTAGCAGGCC CTTCGGGGTG CTGACGAGTG GCGCACGGGT GAGTAACGCG TGGATGACCT
ACCCAGATGT GGGGGACAAC AGTTGGAAAC GACTGCTAAT ACCGCATAAT CCCTAAGGGG
GAAAGGCTTA GGCCGCATTT GGAGGGGTCC GCGTTGGATT AGGTAGTTGG TGGGGTAAAG
GCCTACCAAG CCGACGATCC ATAGCTGGTC TGAGAGGATG ATCAGCCACA CTGGAACTGA
GACACGGTCC AGACTCCTAC GGGAGGCAGC AGTGGGGAAT ATTGCGCAAT GGGGGAAACC
CTGACGCAGC AATGCCACGT GAATGATGAA GGCCTTCGGG TTGTAAAGTT CTTTTAGTAG
GGAAGATAGT GACGGTACCT ACAGAAAAAG CTCCGGCTAA CTCCGTGCCA GCAGCCGCGG
TAATACGGAG GGGGCAAACG TTGTTCGGAA TCACTGGGCG TAAAGGGCGC GTAGGCGGTT
ATCTAAGCCA GAAGTGAAAT CTCGGGGCTC AACCTCGAAA CTGCTTTTGG AACTGGAAGA
CTAGAATCCG GTAGAGGATG GTGGAATTCC CCGTGTAGAG GTGAAATTCG TAGATATGGG
GAGGAACACC GGAGGCGAAG GCGGCCATCT GGGCCGGTAT TGACGCTGAG GCGCGAAAGT
GTGGGTAGCG AACAGGATTA GATACCCTGG TAGTCCACAC CGTAAACGAT GAGTGCTAGT
AGTTGCGGGT ATCGACCCCT GCGGCTACGA AGTTAACACG ATAAGCACTC CGCCTGGGGA
GTACGGCCGC AAGGTTAAAA CTCAAAGGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA
TGTGGTTTAA TTCGATGCAA CGCGAAGAAC CTTACCTGCT TTTGACATCC TTGGAACCTT
ACGGAGACGT AGGGGTGCTT TTCGGAGAAC CAAGTGACAG GTGCTGCATG GCTGTCGTCA
GCTCGTGTCG TGAGATGTTG GGTTAAGTCC CGCAACGAGC GCAACCCCTG CCTTTAGTTG
CCATCATTAA GTTGGGCACT CTAGAGGAAC TGCCGGTGTT AAGCCGGAGG AAGGTGGGGA
TGACGTCAAG TCATCATGGC CCTTATGGGC AGGGCTACAC ACGTGCTACA ATGGCGGATA
CAGAGGGCGG CGAAGCAGTG ATGTGGAGCG AATCTCTTAA AGTCCGTCTC AGTTCGGATT
GGAGTCTGCA ACTCGACTCC ATGAAGTTGG AATCGCTAGT AATCGCGGAT CAGCATGCCG
CGGTGAATAC GTTCCCGGGC CTTGTACACA CCGCCCGTCA CACCATGGGA GTTGGTTTTA
CCCGAAGCCG GTGGCCTAAC CTTTCGAGGG GGGAGCTGTC TACGGTAAGA TCAGCGACTG
GGGTGAAGTC GTAACAAGGT AGCCGTAGGG GAACCTGCGG CTGGATCACC TCCTTT
|
|---|
| Protein sequence | |
|---|
| |