| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3757 |
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| Symbol | |
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| ID | 4482041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4716781 |
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| End bp | 4718451 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724513 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_867648 |
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| Protein GI | 117927031 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.189784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGC GCACACTCAC TGCCATTGTA CTCTCTTTTG TTCTGCTCAC CGCTTTTCAG
TTCTATATGG CCTGGAAGTA TCCCCCTGCG GAGTTAACGG GTGAGCAGGT ACAATCCGGT
GAGAGCAGTG CTCCTGCACC CCTCGCCTCC ACGGCCCCGG TTGCTGACGC CTTGCCCCCC
CCTGTGGAGG GTATGGCTGG GTCGGCTCCT CAACAGGCCA TGAGCCAGCC GTTGATCAAT
ACCGATGCCA AGAGCCTATT GCATTTTAAA AACGATCTGG TCGAAGGCTC CCTGAGCCTA
CAAGGTGGCC GTTTGGTGGG AATGGATTTT CTTCAACACA CCGATGTGTT GGGGGGTAAA
CCCATTAGCT TTATGGGGAT AAGCCAAGTT GAATCGTTTT ATCAGGAGAG CGGTTTTCTA
CCGGTGGCTG GCAGTGCGAT CAAAGCCCCC GATGCAAACA CCCAGTGGCA ACTGATCGGT
AAAGAGAGCT TGCAGGGGGC TGGTGAATTT AAGTTGGTGT GGGATAATGG GGAAGGGATT
GTGTTTGAGA AGCTGTTCTC CTTTGCCCAG GGTAGCTACC TGTTCAAGGT AGAGGATCGT
CTCATCAACA ACAGCGCGGC GGCTTTGGGT GTCTACCATT ACAGCCAATT TAAGCGTATT
CCTGTGATTA ACAGCCAGTC CATGCTGGCT ATGTCGGATT TTCAGGGACC CATGGCTTAC
TTAAATGGTG AGCGTTATCA GCACAGCTAT GAAGATTTGA CGGCTCAGGA TCTGCGCGAG
AAGGGGCATG GGGGTTGGAC CGGTTTTAGC GATAAATATT TCCTGGCGGC AATGGTGGCA
AAACCCTTGC CCCCAGAGGC CCAGCCCCGC CGCTACTACT TCGATTATGA TCGCCCCAAC
TATCGTGTTG GTATGGTGGA AAACAGCGTG ATCATTCCTG CGGGGCAATC CTTAGCGGTG
GATTATGACC TGTTTATTGG TCCTAAAGAG ATCTCTACTT TAGAGCGTTC TAACCTCTCT
TTGGAGCGCT CCATTGACTA TGGCTGGTTT CACTTTTTGG CAGAGCCTTT GGTTAAGGTG
CTCAACTTTT TCAACAGTGT GGTGCACAAC TATGGGGTGG CGATCATTCT GTTGACCTTA
GCGATTAAGC TGCTTTTCTT CCCGCTGGCC AACAAGAGCT ACCGCTCTAT GAACGCCATG
AAGAAGTTGC AACCCAAGAT TGAAGAGCTG AAAAAGTTGC ATGGTAGCGA TCGCAACAAG
ATGAATGAAG CGATGATGAA GCTCTACCAA ACCCATAAGG TCAATCCTTT GGGGGGCTGT
TTGCCCATTT TGGTGCAGAT TCCCGTGTTC TTTGCCCTCT ATAAAGTGCT GTTCCTCTCG
GTTGAGATGC GCCACGCCCC CTTTATGCTG TGGATTCCTG ATTTGTCGGC GATGGACCCC
TTCTATGTAT TGCCCTTGTT GATGGGCGGC TCTATGTTTT TGCAGAGCAA ACTCAACCCG
ACGCCATCGG ACCCCATGCA GGCCAAGATT ATGATGTTTT TGCCGGTGAT CTTTACCGTG
ATGTTCCTCT CTTTCCCCTC TGGGTTGGTG CTGTACTGGC TGGTTAACAA CGTGTTGTCG
ATTTCCCAGC AGTACTACAT TATGAAAAAA ATGGAACATG AGCCTAGCTG A
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| Protein sequence | MDRRTLTAIV LSFVLLTAFQ FYMAWKYPPA ELTGEQVQSG ESSAPAPLAS TAPVADALPP
PVEGMAGSAP QQAMSQPLIN TDAKSLLHFK NDLVEGSLSL QGGRLVGMDF LQHTDVLGGK
PISFMGISQV ESFYQESGFL PVAGSAIKAP DANTQWQLIG KESLQGAGEF KLVWDNGEGI
VFEKLFSFAQ GSYLFKVEDR LINNSAAALG VYHYSQFKRI PVINSQSMLA MSDFQGPMAY
LNGERYQHSY EDLTAQDLRE KGHGGWTGFS DKYFLAAMVA KPLPPEAQPR RYYFDYDRPN
YRVGMVENSV IIPAGQSLAV DYDLFIGPKE ISTLERSNLS LERSIDYGWF HFLAEPLVKV
LNFFNSVVHN YGVAIILLTL AIKLLFFPLA NKSYRSMNAM KKLQPKIEEL KKLHGSDRNK
MNEAMMKLYQ THKVNPLGGC LPILVQIPVF FALYKVLFLS VEMRHAPFML WIPDLSAMDP
FYVLPLLMGG SMFLQSKLNP TPSDPMQAKI MMFLPVIFTV MFLSFPSGLV LYWLVNNVLS
ISQQYYIMKK MEHEPS
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