| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3740 |
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| Symbol | |
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| ID | 4483398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4696216 |
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| End bp | 4697475 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724496 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_867631 |
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| Protein GI | 117927014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000793006 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTATT TTCACTATCA AGATGACCAA CTTTTCTGTG AAGAGGTGGC TTTAGAGCAG
ATCGCGCAAG CGGTGGGAAC CCCCTTTTAT TGCTATTCAG AGCGAACCTT GTTGCACCAT
TTACAGGTGT TTCAGCAGGC TTTCGCCAGC CAAGATAGCC TGATCTGTTA TTCGGTTAAG
GCTAACAGCA ATCTGGCTGT GTTGGATGCT TTGGCCAAAC AGGGTGCGGG TTTTGATATT
GTCTCGGGGG GCGAGTTGGA GCGGGTACGG CGGGTTGGCT GTCCTGGCGA GCGGGTGGTT
TTTTCTGGTG TGGGCAAAAG CCGGGCGGAG ATTCAGGCCG CTTTGGCCTA TGGCGTGCGC
ATGTTTAATG TGGAGTCGAT CCCCGAACTA CAGCGCATTC AAGAGGTGGC GCTGGCCATG
GATGTGGCGG CCCCGGTGAC GCTGCGCATT AATCCCGATG TGGACCCCAA AACCCACCCC
TATATCTCCA CCGGCTTGAA ACGCAATAAG TTTGGTATTC CCTTTGGGGA GGCGGTGGCG
GTCTATCAGC AGGCGGCGCA GATGAGCCAT GTGCAGGTGG TGGGGCTGGA TTGTCACATC
GGTTCGCAGC TGACCCAGCT CTCTCCCTTT GTGGATGCCC TCAAGCGGGT GATGGTATTG
ATTCAGGCGC TCAAGGGCCA CGGTATTGAG ATTAAAAATC TGGATCTTGG TGGTGGTTTG
GGCATCCCCT ATGAGGATGG CGATACCCCG CCCAGCCCGG CGGAGCTGGC CGCAGCCCTG
CTGGAGCAGT TGGATGGCAT GCCGGTGACG GTGATATTAG AGCCTGGGCG TGCCATTGTG
GGGAATGCCG GGGTGTTGGT GACGCGGGTG GAGTATGTGA AAAAGGGCGA GCAGCGCCAC
TTTGTGATTA CCGATGCCGG TATGAACGAT CTGCTGCGGC CTGCCATCTA CAACGCCTAC
CATGGGGTGA TTCCCTTGCA GCGCAAGTTT GACCGTGAGG AGCAGGTGGT GGATGTGGTG
GGGCCAATCT GTGAGACCGG TGATTTTTTT GCGCGGGATC GCTATTTGAG TGAGGTGTAT
CAGGGCGAAC TGCTGGCGGT GCGCTCGGCG GGGGCCTACG GTTTTGTGAT GAGCAGCAAC
TACAACACCC GCCCACGGGT GGCGGAAGTG TTGGTGCGTG GGGATCGCTA CGCGGTGGTG
CGCAAGCGGG AGAGCGTGGC GCAGCTGTTG GAGAATGAGT CCCTGTTTGA GGATGCCTGA
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| Protein sequence | MDYFHYQDDQ LFCEEVALEQ IAQAVGTPFY CYSERTLLHH LQVFQQAFAS QDSLICYSVK
ANSNLAVLDA LAKQGAGFDI VSGGELERVR RVGCPGERVV FSGVGKSRAE IQAALAYGVR
MFNVESIPEL QRIQEVALAM DVAAPVTLRI NPDVDPKTHP YISTGLKRNK FGIPFGEAVA
VYQQAAQMSH VQVVGLDCHI GSQLTQLSPF VDALKRVMVL IQALKGHGIE IKNLDLGGGL
GIPYEDGDTP PSPAELAAAL LEQLDGMPVT VILEPGRAIV GNAGVLVTRV EYVKKGEQRH
FVITDAGMND LLRPAIYNAY HGVIPLQRKF DREEQVVDVV GPICETGDFF ARDRYLSEVY
QGELLAVRSA GAYGFVMSSN YNTRPRVAEV LVRGDRYAVV RKRESVAQLL ENESLFEDA
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