| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3724 |
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| Symbol | |
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| ID | 4482454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4677553 |
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| End bp | 4678512 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724480 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_867615 |
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| Protein GI | 117926998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGCA GACGTCGTAA AGGGGTGGTG ATTCACGGTT GGTTGGCGAT CCACAAGGAG
CCTGGTTTAA GTTCCAGTCA GGTTGTGGAG CGGGTGATCC GCACCACCAA GGCCAATAAG
GCCGGTCATG GGGGTACTTT GGATCCCTTT TCTGAGGGGG TTTTGCCCAT TGCTTTGGGG
GAGGCCACCA AGACCAGCGG TATGGTGCTG AATGGGGATA AAAGCTACCG TTGCTGGTTA
AAGTTTGGCC AGGAGACCGA CAGCGGCGAT CTAACCGGCG TGCTGTTGGA AGAGCAAGGG
CGGGTGCCTA GCGAGGCAGA GTTGCGGGCT GTGCTCCCGC AATTTATGGG TGAAATTGAA
CAGGTTCCCC CGGTTTTTTC GGCGCTTAGG GTAGACGGTG AGCGGGCTTA TAAACGGGCC
AGACGCGGAG AAGAGGTGCA ATTGGCCTCG CGACGTGTTA GAATTGACCG CCTTGAACTG
GTTGGATTTG AAGCAGATAC CGCCGTTTTG GATGTAGCGT GTGGGAAAGG CACCTATATT
CGCTCGCTGG GGGTGGACAT TGCCCGGGCG CTGCATAGCC GGGCGCATCT GGTGCGTCTA
CTGCGTACCG GTACCATGGG TTTTGGCCTA AATGATGCTG TTACATTGGA ACAATTGCGT
GAAGCCTGTA GTGAGGGTAG GCTACAGGAG ATTTTATACC CTGTTGACCG GGTGCTGGAC
GACATCCCGG CTCTACGGAT GACAGGGAAC GCTTGGTACC GCCTGCGCCA AGGGCAGGAG
GTTGAGGTGG AGGATGCAGC AACCCCGGCG GGGATGGTGC GTTTGCAGGA TCCCGACGGC
CAGTTTGGCC TGCTGGGGGA GATCTCAGCG CAAGCTGATC TGCAAGGTTT GCGGCGGATT
AAACCGACGC GGCTCTTTCA TCTGGACGAG ACACCAGGCA GTGACCCAAC GGCCCAATGA
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| Protein sequence | MGRRRRKGVV IHGWLAIHKE PGLSSSQVVE RVIRTTKANK AGHGGTLDPF SEGVLPIALG
EATKTSGMVL NGDKSYRCWL KFGQETDSGD LTGVLLEEQG RVPSEAELRA VLPQFMGEIE
QVPPVFSALR VDGERAYKRA RRGEEVQLAS RRVRIDRLEL VGFEADTAVL DVACGKGTYI
RSLGVDIARA LHSRAHLVRL LRTGTMGFGL NDAVTLEQLR EACSEGRLQE ILYPVDRVLD
DIPALRMTGN AWYRLRQGQE VEVEDAATPA GMVRLQDPDG QFGLLGEISA QADLQGLRRI
KPTRLFHLDE TPGSDPTAQ
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