Gene Mmc1_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3719 
Symbol 
ID4482449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4671009 
End bp4671530 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content51% 
IMG OID639724475 
Producthypothetical protein 
Protein accessionYP_867610 
Protein GI117926993 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0526022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATT TGCTCATGGT TACGCTATTA AGCGGGCTTT GGCTGTTCCC GGCTACGGCT 
CAGGCGCTGG TCAATGAACC CTTTTTCCAG GACTCTTTTT TGGATATGGC CGAGGATGCC
GCAACCGCAG CCCAGCACCA GAAGATCTAT ATGGTCTTCT ACGAGCAAGA GGGCTGCCCC
TACTGTGTAC AGTTACATCA AGAGACACTG CCCGACCCCC AAGTACAGGC CTATATGAAG
GCCCATTTTT ATCCTGTTAT ATTGGATATT TATGGTGCCC GTGAGGTTAC CGATTTTCAG
GGCAACGCCA CCCAGGAGAA GGCCTTTGCG CGGGCCCAAC GGGTGCACTT CACCCCCACG
GTTATCTACT ATGATGGTAC CGGGCGAGAG CTGTTTCGCC TAGCGGGATT TTGGAAGCCC
ATGCACTTTA AAGCTTCCAT GCGCTATGTT CAGGAAGGAC ATTATAAGAA CATGAATTTT
CAAGATCTTA TCCGTAAGAT TGTACAAGAA CAGCAGCCCT GA
 
Protein sequence
MRHLLMVTLL SGLWLFPATA QALVNEPFFQ DSFLDMAEDA ATAAQHQKIY MVFYEQEGCP 
YCVQLHQETL PDPQVQAYMK AHFYPVILDI YGAREVTDFQ GNATQEKAFA RAQRVHFTPT
VIYYDGTGRE LFRLAGFWKP MHFKASMRYV QEGHYKNMNF QDLIRKIVQE QQP