Gene Mmc1_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3709 
Symbol 
ID4481046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4661047 
End bp4661448 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID639724465 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_867600 
Protein GI117926983 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0929993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAGA TTCCCCGACC CATCGTCAAC CAAATTCTCA GCCACGCCCT GCGCTGTCAC 
CCCCAGGAGT GCGTTGGCAT TCTCTCTGGG CAGGGCCGCC TGATTCGCCA TTGCCACCCC
ATGACCAATG CCTTGGCCGA CACCCGCCGC TTTTTGGCCG ATCCCAATGA GCAGATCCAA
CTCTTTAAGG CGCTGCGCAC GCAGGATGAG CAGGTGGTCG CCCTCTACCA TAGCCACCCC
ACCGCACCCG CCGAACCCTC GATGCTGGAT CTACAGCAGG CTCACTATCC CGATGCACTC
TACCTTATTG TCTCGCTGGC CACCGATGGC CGCTTGGATA TGCATGGCTA TACCATTCAC
GAGGGTCAGG CTACCCTTCA GGAACTGACC ATCTACGATT GA
 
Protein sequence
MWEIPRPIVN QILSHALRCH PQECVGILSG QGRLIRHCHP MTNALADTRR FLADPNEQIQ 
LFKALRTQDE QVVALYHSHP TAPAEPSMLD LQQAHYPDAL YLIVSLATDG RLDMHGYTIH
EGQATLQELT IYD