| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3705 |
|---|
| Symbol | |
|---|
| ID | 4481042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4658430 |
|---|
| End bp | 4659179 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639724461 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_867596 |
|---|
| Protein GI | 117926979 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000170501 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAC CTACCTGTCT GTCGGAACGC CACTTCCCCA GTGAGGAACA GAGCATCGCC
ACCCTAGCCG AAACCGTTGT TATGCGCTTG CAGCGGGGTA TTCAACAGCG TGGTGAAGCG
GGCTTAATCG TACCGGGTGG GCGCTCTCCT CGGGGTCTGT TTCAACAGCT TTGCCACATG
GAGCTCCCAT GGGAAAAGGT GACGGTTACG TTGACCGATG AACGCTTGGT CTCCCCCGAC
GCCCCAGAAA GCAACATTCG CCAACTCCGC CAACTCTTTT TGCGTCAAGG CGCCGCCAAG
GCCAAACTGC TGCCCCTATT GCCAGCCATC TGCGATCCCA CCCAAGCCGC CAAGCAAGCC
TGCACCCAGC TACAACAGTT TCCCTGGCCT GCCGATGTTA CCCTGCTCGG CTTTGGTAGC
GAGGATCACC TTGCCTCCCT TTTTCCCGGC GATGCACAAC CCTTGAGCTT TCCAGAGCAT
ATCCGCTGTG TGGCAACCCG TAGTCCAACC CCACCCAGAG CCCGTATTAG CCTAACCCCC
GCCACTTTGC TGGATAGCCG TTGGATTGGG GTGCTGATCA ACTCCCACGC CAAACTGGAC
CGTTTTGAAC TGGCCAAACA GGACGGCCCC CCCAGCGCCA TGCCGTTGCG TACCATTCTC
CACCAAGACC GCATACCGGT TACCGCCTGG ATCCACTGCG ATCCCCAAAC ACACCCATAC
GGATGTAAAA AAACCCATGT ACATCAATGA
|
|---|
| Protein sequence | MSLPTCLSER HFPSEEQSIA TLAETVVMRL QRGIQQRGEA GLIVPGGRSP RGLFQQLCHM
ELPWEKVTVT LTDERLVSPD APESNIRQLR QLFLRQGAAK AKLLPLLPAI CDPTQAAKQA
CTQLQQFPWP ADVTLLGFGS EDHLASLFPG DAQPLSFPEH IRCVATRSPT PPRARISLTP
ATLLDSRWIG VLINSHAKLD RFELAKQDGP PSAMPLRTIL HQDRIPVTAW IHCDPQTHPY
GCKKTHVHQ
|
|---|
| |